| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2517 |
|---|
| Symbol | |
|---|
| ID | 5706291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2876801 |
|---|
| End bp | 2877361 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641271981 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001537351 |
|---|
| Protein GI | 159038098 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.620337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00304411 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAGC CGTGGGATCC CGATTCGGGG CGGGCCATGC CGGCGACGGA TGATGACGGC
GCGGTGGGCT ACCGGGGTGT GACGGCATGC CACGCGGTGG GCATCACGTA CCGACAGTTG
GATTACTGGG CGCGCACGGG TCTGGTCGTG CCGGGTGTGC GTGACGCGTC GGGTTCGGGG
ACGCAGCGGT TGTACTCGTT CCGGGATCTG GTGGTGTTGA AGGTGGTCAA GCGGCTGCTG
GATGCCGGCG TGTCGTTGCA GAACATCCGT CGGGCGATCG AGGCGTTACG GTCGCGGGGG
GTGGCGGACC TGGCCGGCAT CACGTTGATC TCCGACGGGA CGACGGTGTA CGAGTGTCGG
TCGCCGGAGG AGGTGGTTGA CCTGTTGCAA GGTGGCCAGG GGGTGTTCGG GATCGCGATC
GGTGGGGCGT TCAAGGAGGT CCAGGGGTCG TTGTCGCATC TACCGGCGGA GTCGGTGAGC
GCGCAGCCGG CGGTACCGGC TGCGGTGGAT GTGGTGGGTG ACGAGTTGGC GGCGCGGCGG
GCGCGGCGAC GGGTGGGTTG A
|
|---|
| Protein sequence | MQEPWDPDSG RAMPATDDDG AVGYRGVTAC HAVGITYRQL DYWARTGLVV PGVRDASGSG
TQRLYSFRDL VVLKVVKRLL DAGVSLQNIR RAIEALRSRG VADLAGITLI SDGTTVYECR
SPEEVVDLLQ GGQGVFGIAI GGAFKEVQGS LSHLPAESVS AQPAVPAAVD VVGDELAARR
ARRRVG
|
|---|
| |