Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2486 |
Symbol | |
ID | 5704689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2844229 |
End bp | 2844933 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271950 |
Product | thymidine kinase |
Protein accession | YP_001537320 |
Protein GI | 159038067 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1435] Thymidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.472803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGATC ACGCCACCGC CGACTCGCCC CGCCTGGCCC GCCCCCGCAG ACCCGACGAA CAGCCTGCCG GCGGTGGCGC GGACGGGCGA CCACTGCACG CGGCGGCGCT GCGGTTCTAC TGGGGCCCGA TGGACTGCGG CAAGTCCACG ATGGCGTTGC AGATGAACCA CAACCATGCC CGGCAGGGCC GGCGGGGCCT GGTCACCACC CGCATCGACC GGTCGCTGGG TCCGCAGGTG ACCACCCGCA TCGGGCTGGC GCACGAGGCG ATCGAGGTCA TCGACGAGTT GGACCTGCGT GTCCTGGTCA CCAGCCGGCG GGCCGAGGGG GTGCGGATCG ACTACCTGAT CTGCGACGAG GCCAGCTTCT ACCAGATCGC GCACGTCGAG CAGATGGCCG AGCTGGTCGA CAGCTACGAC GTCGACGTGT ACGCGTTCGG CCTGGCCACC GACTTCCGGT CCCGGCTGTT CCCCGCCGCG CGGCGGCTGT TCGAGCTGGC GGACACGGTG GCCCGAATCC AGGTCGAGGT GCTCTGCTGG TGCGGCCGGG AGGGGCTGCT CAACGCGCGC GTGGTCAACG GGCAGGTGGT TCGGGAGGGC GCGCAGGTGG TCGTGGGCGA CACGGCCTAC ACCGCCCAGG TGCGCTACCA GGTGCTCTGC CGACGCCACT ACCGCGCCGG CGACCTCGGT CCCGGGTCCG GGTGA
|
Protein sequence | MTDHATADSP RLARPRRPDE QPAGGGADGR PLHAAALRFY WGPMDCGKST MALQMNHNHA RQGRRGLVTT RIDRSLGPQV TTRIGLAHEA IEVIDELDLR VLVTSRRAEG VRIDYLICDE ASFYQIAHVE QMAELVDSYD VDVYAFGLAT DFRSRLFPAA RRLFELADTV ARIQVEVLCW CGREGLLNAR VVNGQVVREG AQVVVGDTAY TAQVRYQVLC RRHYRAGDLG PGSG
|
| |