Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2479 |
Symbol | |
ID | 5706084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2836942 |
End bp | 2837670 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271943 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001537313 |
Protein GI | 159038060 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0860852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.421105 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCCCG TAACCGTCAT CACCGGCGGC AGCCGCGGAA TCGGCGCCGC CACCGCCCGC CGCCTCGCCC GCGCCGGCCA CCACATCGCC TTCTCCTACC AACGCGACCG CGCCGCCGCC GACACCGTGC TCGCCGAGCT ACACGCCACC GGAACCACCG CCGTCGCCGT ACCCGTCGAC ACCCGCGACC CCGACCAGAT CGCCACCCTG TTCGCCGCCG CAGCCGACCT CGGCGACCTC ACCGGCCTGG TCAACAACGC CGGCGTCACC AGCCCCATCG GCCCCTTCGT CGACCTCGAC CCCACCGACC TACGCCACGT CGTCGACGTC AACCTCATCG GCTACATACT CGCCGCCCAG CAGGCCGCCC GCCAGATGCC CGCCGGCGGC GCCATCGTCA ACATCTCCTC CGCCGCCGCC ACCCTCGGCT CACCCGGCGA ATACGTCCAC TACGCCGCCG TCAAAGCCGG CACCGACGCC CTCACCATCG GCCTGGCCAA GGAACTCGCC CCCCGCGGCA TCCGCGTCAA CGCCGTCGCC CCCGGCATCG TCCGCACCGA CATCCACACC CTGTCCGGCC AACCCGATCG GCCCGAGCAA ACCGCCTCCC GCATCCCACT CGGGCGTCCC GGCGAACCCG ACGAAGTCGC TGCCGCCATC ACCTGGCTAC TCGGACCCGA CGCCAGCTAC ACCACCGGCA CCATCCTTCG CGTCAGCGGC GGCCTCTGA
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Protein sequence | MNPVTVITGG SRGIGAATAR RLARAGHHIA FSYQRDRAAA DTVLAELHAT GTTAVAVPVD TRDPDQIATL FAAAADLGDL TGLVNNAGVT SPIGPFVDLD PTDLRHVVDV NLIGYILAAQ QAARQMPAGG AIVNISSAAA TLGSPGEYVH YAAVKAGTDA LTIGLAKELA PRGIRVNAVA PGIVRTDIHT LSGQPDRPEQ TASRIPLGRP GEPDEVAAAI TWLLGPDASY TTGTILRVSG GL
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