Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2468 |
Symbol | |
ID | 5706266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2826700 |
End bp | 2827431 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641271934 |
Product | hypothetical protein |
Protein accession | YP_001537304 |
Protein GI | 159038051 |
COG category | [S] Function unknown |
COG ID | [COG1478] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01916] F420-0:gamma-glutamyl ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.65586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGACCG CCGTCCCGAC CTCCGCTTTC TCCGCTTTCG CCCTGGAGCC CTTTCCCGAG CTCCAGCCGG GTGCGGACCT GGCGGGCGCC ATCACCGGCG TCCTGGCCTG TACTGGCATC GAGTTACAGG ACGGGGATGT GGTGGTGGTG GCTTCCAAAG CCGTGAGTGT CGCGGAGAAT CGGTACGTGG ATCTGGCCGG TGTCGTCCCG GGTCCGGAGG CGCTGGAGTT GTCCGCACGC ACGGGCAAGC CCGCCGAGGT CGTGCAGCTG ATCTTGGATT CCAGTGACAG TTACTTTCTG GCTGCCGAGG AGGGCCCGAT CATCGCGCGG CACAGGCTCG GCTTCCAGCT CACCTCCGCC GGGATCGACC GGGCCGGCCC GCAGGGTGCG TGGCTGTTGC CGGTGGATCC GGACGCCTCC GCCCGCGCCC TGCGCGACGC GTTGATCGCC TACTCCGGCG CGGATGTGGC GGTGGTGGTC GCGGATTCTG ACGGTCGTGC CGATCGGCGT GGGGCGACTG TCATTTCGAT CGGCGCGGCG GGCGTGGGGC CTTTGCGTGT GACGGAGTTC GGCGGTAAAC GGCAGGAAGA GACTTTCACT GACCTGATCG CCGCGGCGGC CGGGATCATC CTCGGGCAGC GGGGCCGTGG GGCCCCGGTC GCCGTCCTGC GCGGCATCGC CTATGAGAGC AGTGATGCGG GCGTGGCGTC GATGCTCCAA CACCGGCCGT GA
|
Protein sequence | MMTAVPTSAF SAFALEPFPE LQPGADLAGA ITGVLACTGI ELQDGDVVVV ASKAVSVAEN RYVDLAGVVP GPEALELSAR TGKPAEVVQL ILDSSDSYFL AAEEGPIIAR HRLGFQLTSA GIDRAGPQGA WLLPVDPDAS ARALRDALIA YSGADVAVVV ADSDGRADRR GATVISIGAA GVGPLRVTEF GGKRQEETFT DLIAAAAGII LGQRGRGAPV AVLRGIAYES SDAGVASMLQ HRP
|
| |