Gene Sare_2468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2468 
Symbol 
ID5706266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2826700 
End bp2827431 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content69% 
IMG OID641271934 
Producthypothetical protein 
Protein accessionYP_001537304 
Protein GI159038051 
COG category[S] Function unknown 
COG ID[COG1478] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01916] F420-0:gamma-glutamyl ligase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.65586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCG CCGTCCCGAC CTCCGCTTTC TCCGCTTTCG CCCTGGAGCC CTTTCCCGAG 
CTCCAGCCGG GTGCGGACCT GGCGGGCGCC ATCACCGGCG TCCTGGCCTG TACTGGCATC
GAGTTACAGG ACGGGGATGT GGTGGTGGTG GCTTCCAAAG CCGTGAGTGT CGCGGAGAAT
CGGTACGTGG ATCTGGCCGG TGTCGTCCCG GGTCCGGAGG CGCTGGAGTT GTCCGCACGC
ACGGGCAAGC CCGCCGAGGT CGTGCAGCTG ATCTTGGATT CCAGTGACAG TTACTTTCTG
GCTGCCGAGG AGGGCCCGAT CATCGCGCGG CACAGGCTCG GCTTCCAGCT CACCTCCGCC
GGGATCGACC GGGCCGGCCC GCAGGGTGCG TGGCTGTTGC CGGTGGATCC GGACGCCTCC
GCCCGCGCCC TGCGCGACGC GTTGATCGCC TACTCCGGCG CGGATGTGGC GGTGGTGGTC
GCGGATTCTG ACGGTCGTGC CGATCGGCGT GGGGCGACTG TCATTTCGAT CGGCGCGGCG
GGCGTGGGGC CTTTGCGTGT GACGGAGTTC GGCGGTAAAC GGCAGGAAGA GACTTTCACT
GACCTGATCG CCGCGGCGGC CGGGATCATC CTCGGGCAGC GGGGCCGTGG GGCCCCGGTC
GCCGTCCTGC GCGGCATCGC CTATGAGAGC AGTGATGCGG GCGTGGCGTC GATGCTCCAA
CACCGGCCGT GA
 
Protein sequence
MMTAVPTSAF SAFALEPFPE LQPGADLAGA ITGVLACTGI ELQDGDVVVV ASKAVSVAEN 
RYVDLAGVVP GPEALELSAR TGKPAEVVQL ILDSSDSYFL AAEEGPIIAR HRLGFQLTSA
GIDRAGPQGA WLLPVDPDAS ARALRDALIA YSGADVAVVV ADSDGRADRR GATVISIGAA
GVGPLRVTEF GGKRQEETFT DLIAAAAGII LGQRGRGAPV AVLRGIAYES SDAGVASMLQ
HRP