| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2466 |
|---|
| Symbol | |
|---|
| ID | 5706264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2825354 |
|---|
| End bp | 2826016 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641271932 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_001537302 |
|---|
| Protein GI | 159038049 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACCA CCACGATCGG CGACGTGAAG GTCTTGCTGC CGAACCTCGA TCCGGACGAC
CTCGACACCA GGACGGACCT GGACGGTGAC CTCACCGAGG CATTGGTCGA GGGCGCGGCG
TGGCGCGGTG CGCAGCTTGC GGATGTCAGC ATCCGCAGCA GCCTGATCAC CGGTGTGGAC
CTGGGTGAGA GCACCTGGGA GGCGGGGAGC CTGTTTAGCT GCGAGGTCAC CCGTACCGAT
TTCTCCGGCG CGACCCTGAC CGGCATCGCC ATCGAACGGT GTGCGATCAC CGGCTCCCGG
TTCACCGGCA CCAGGTTCAC CGACGTACGT CTCAAGGATG TCCTGTTCGA GGGCTGCCGC
CTTGACTACG CCACCTTCCA CTGCGTCGCC GCCGCCGGCT CGGTCGCGTT CACCAACTGC
ACTCTCAGCA ACGGCGAGTG GTCTTCCTGT CGGCTGCCGC GTATCGCGCT GCGGTCCTGT
GACCTTGCCG GTCTGGAGTG GGACGCCTGC CACCTCGACG GTGCCGATCT CCGGGGAAGC
CGCCTCCACG GGCTCAGGGC GCCGTTGGAC AATCTGCGCG GCGTCACCCT CGGCGAGGAT
CAACTTCCTG ACTTCACTCA GCTGACCGTC GCTGCTCTCC ACCTGACCGT CCGCAGCGAC
TGA
|
|---|
| Protein sequence | MRTTTIGDVK VLLPNLDPDD LDTRTDLDGD LTEALVEGAA WRGAQLADVS IRSSLITGVD
LGESTWEAGS LFSCEVTRTD FSGATLTGIA IERCAITGSR FTGTRFTDVR LKDVLFEGCR
LDYATFHCVA AAGSVAFTNC TLSNGEWSSC RLPRIALRSC DLAGLEWDAC HLDGADLRGS
RLHGLRAPLD NLRGVTLGED QLPDFTQLTV AALHLTVRSD
|
|---|
| |