| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2455 |
|---|
| Symbol | |
|---|
| ID | 5707700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2814429 |
|---|
| End bp | 2815076 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641271921 |
|---|
| Product | major intrinsic protein |
|---|
| Protein accession | YP_001537292 |
|---|
| Protein GI | 159038039 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAGT ACACGACTGA GCTCGTCGGA ACATACTTCC TGGTACTGAC AATCGGCCTA
GCGGTTACCA CGATGAACGC CCTGGCGCCA TTGGCAATCG GCGGGATTCT CATGGTCATG
GTATATGCAG GAGGCCACAT TTCCGGCGCT CACTTCAATC CCGCCGTAAC GCTGGCCGTT
CTCATCCGTG GCCGAATAGG GCGAGCCGAC GCCGGAGGAT ACCTCGTCGC CCAAGTCCTC
GGCGGCCTGG CAGGCGCTCT GACCAGCCGC CTCGTCCTCC ACGACACGAA GCCGGTCGAG
CTGTCACTAT CGGGCCGGGA AATCTGGATG GCGCTGCTGG TGGAAGCCCT GTTCACCTTC
GCCCTCGCCT ACGTGGTACT CAATGTCGCC ACCAGCCGCA GCCACCCGGA CAACTCCTTC
TACGGCCTGG CAATCGGGGG CACCGTGATG GTGGGGGCGG TCACGGTCGG CGGAATCTCC
GGCGCCGCAT TCAACCCGGC AGTGGCCATC GGCGGTGCCA CCATCGGCCT CCTCGCCTGG
TCGGCCATCT GGATCCACCT CCTCGCCCAG GCCATCGGAG CAACGCTCGC GGCGACGGCA
TTCCTGGCCC TCAGCGAAGA CGACCGTGAG CACGTCCGAC ACCGGTGA
|
|---|
| Protein sequence | MRKYTTELVG TYFLVLTIGL AVTTMNALAP LAIGGILMVM VYAGGHISGA HFNPAVTLAV
LIRGRIGRAD AGGYLVAQVL GGLAGALTSR LVLHDTKPVE LSLSGREIWM ALLVEALFTF
ALAYVVLNVA TSRSHPDNSF YGLAIGGTVM VGAVTVGGIS GAAFNPAVAI GGATIGLLAW
SAIWIHLLAQ AIGATLAATA FLALSEDDRE HVRHR
|
|---|
| |