Gene Sare_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2421 
Symbol 
ID5706836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2787257 
End bp2787985 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content71% 
IMG OID641271897 
ProductMerR family transcriptional regulator 
Protein accessionYP_001537268 
Protein GI159038015 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0993046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACCGGC CAGTGGATCT GGCGCGGACG CACGGGCTGT CCGCGCAGGC GGTCCGGAAC 
TACGAGCAGG CCGGGATGAT CCCCCCGGCC GCGCGCACGG CGAGCGGCTA CCGGGTCTAC
ACCGACAACC ACGTGGGTGC GCTGGCCGCC TACGTCGCGC TCGTTCAGGG GTACGGCTAC
TCTGCGGCCG GAGAGGTCAT GAGATCGGTA CTCCGAGGTG ATCTCCCGTC GGCCTTGGCC
ATGCTCGATG CTGCCCATGT GCTGCTGCAA CGCGACCGGG AGACCCTGGA CCGGGTCGCC
TCAGCAGCCG TCGTACTGGC GTCCGCCCCG CCGGCCGGGA CAGCTCCGGA ACGGCCAGTC
TCGGTCGGAG TCCTCGCCCA CCGGCTCGGT GTCACCCCGG CCACGCTACG CAAGTGGGAA
CGCGCCGGTG TCCTGGCCCC GGCCCGGTCA GGGACCGCGC GCGCATACTC ACCCGAGGAC
GTACGCGACG CCGAACTCGC CCACCTCCTG CGTCGGGGCG GCTACCTGCT GGATCACATC
GCGGCCGTGA TCGAGCAGGT GCACACCGCG GGTGGGGCCG GTCCGTTGGC GGACTCGATC
GACCAGTGGC GGGAGCGGAT CACGGCCCGT GGCCTGGCGA TGCTCACCGG ATCTGCCCGC
CTCGCGGAGT ACCTCTCCTT TCTCGAGCTG ACTCACGGGA ACGCCGCCGC CTCACACGAT
CGACGATGA
 
Protein sequence
MYRPVDLART HGLSAQAVRN YEQAGMIPPA ARTASGYRVY TDNHVGALAA YVALVQGYGY 
SAAGEVMRSV LRGDLPSALA MLDAAHVLLQ RDRETLDRVA SAAVVLASAP PAGTAPERPV
SVGVLAHRLG VTPATLRKWE RAGVLAPARS GTARAYSPED VRDAELAHLL RRGGYLLDHI
AAVIEQVHTA GGAGPLADSI DQWRERITAR GLAMLTGSAR LAEYLSFLEL THGNAAASHD
RR