Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2421 |
Symbol | |
ID | 5706836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2787257 |
End bp | 2787985 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641271897 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001537268 |
Protein GI | 159038015 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0993046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTACCGGC CAGTGGATCT GGCGCGGACG CACGGGCTGT CCGCGCAGGC GGTCCGGAAC TACGAGCAGG CCGGGATGAT CCCCCCGGCC GCGCGCACGG CGAGCGGCTA CCGGGTCTAC ACCGACAACC ACGTGGGTGC GCTGGCCGCC TACGTCGCGC TCGTTCAGGG GTACGGCTAC TCTGCGGCCG GAGAGGTCAT GAGATCGGTA CTCCGAGGTG ATCTCCCGTC GGCCTTGGCC ATGCTCGATG CTGCCCATGT GCTGCTGCAA CGCGACCGGG AGACCCTGGA CCGGGTCGCC TCAGCAGCCG TCGTACTGGC GTCCGCCCCG CCGGCCGGGA CAGCTCCGGA ACGGCCAGTC TCGGTCGGAG TCCTCGCCCA CCGGCTCGGT GTCACCCCGG CCACGCTACG CAAGTGGGAA CGCGCCGGTG TCCTGGCCCC GGCCCGGTCA GGGACCGCGC GCGCATACTC ACCCGAGGAC GTACGCGACG CCGAACTCGC CCACCTCCTG CGTCGGGGCG GCTACCTGCT GGATCACATC GCGGCCGTGA TCGAGCAGGT GCACACCGCG GGTGGGGCCG GTCCGTTGGC GGACTCGATC GACCAGTGGC GGGAGCGGAT CACGGCCCGT GGCCTGGCGA TGCTCACCGG ATCTGCCCGC CTCGCGGAGT ACCTCTCCTT TCTCGAGCTG ACTCACGGGA ACGCCGCCGC CTCACACGAT CGACGATGA
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Protein sequence | MYRPVDLART HGLSAQAVRN YEQAGMIPPA ARTASGYRVY TDNHVGALAA YVALVQGYGY SAAGEVMRSV LRGDLPSALA MLDAAHVLLQ RDRETLDRVA SAAVVLASAP PAGTAPERPV SVGVLAHRLG VTPATLRKWE RAGVLAPARS GTARAYSPED VRDAELAHLL RRGGYLLDHI AAVIEQVHTA GGAGPLADSI DQWRERITAR GLAMLTGSAR LAEYLSFLEL THGNAAASHD RR
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