| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2417 |
|---|
| Symbol | |
|---|
| ID | 5706832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2782673 |
|---|
| End bp | 2783257 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641271893 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001537264 |
|---|
| Protein GI | 159038011 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0954159 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA TTCTGCGTCG TAGCGTCCTC GGTGTCGCTG GTCTGGCCCT GTCCACCGGT
GTCATTACCG GCCCGCTGGC CACGTTCACC GACAGCGTCT CCGCGCCGGC CGCCGCAGCA
GCGGTGCAGG TGGCGAAGCC GGACATGGAC ACGTTGATCC CGCACGGCAC CCAGGGCGAG
CAGTCCCGCA TCGACCTGGG TGACGAGCAG ACCGCGAACG TGAAGGCGAT CATTGAGGCC
ACGAAGAAGG CGGGTATGGA CGAGCGTGCC GCCGTGGTGG CGATCGCCAC CAGCCTGCAG
GAGTCGAAGC TGGAGAACCT GGGACACCTG GGTGACCGCA ACGACCACGA CTCGCAGGGC
CTGTTCCAGC AACGCCCGTC CTCCGGGTGG GGCACCGTGG AGCAGATCAC CGACCCCGAA
TACTCCACCA CCGCCTTCCT TGAGGGTTTG AAGCAGGTCG AGGGCTGGCA GGACATGCCC
CTGACCAAGG CCGCCCAGAC GGTGCAGGTG TCGGCGTACC CGTTCCACTA CGCCCAGTGG
GAAACCCAAG CCGCCGACCT CGTCGCCGAG CACTGGACCA GCTGA
|
|---|
| Protein sequence | MNTILRRSVL GVAGLALSTG VITGPLATFT DSVSAPAAAA AVQVAKPDMD TLIPHGTQGE
QSRIDLGDEQ TANVKAIIEA TKKAGMDERA AVVAIATSLQ ESKLENLGHL GDRNDHDSQG
LFQQRPSSGW GTVEQITDPE YSTTAFLEGL KQVEGWQDMP LTKAAQTVQV SAYPFHYAQW
ETQAADLVAE HWTS
|
|---|
| |