Gene Sare_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2402 
Symbol 
ID5703894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2757925 
End bp2758926 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content65% 
IMG OID641271880 
Producttransport system permease protein 
Protein accessionYP_001537251 
Protein GI159037998 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4605] ABC-type enterochelin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0334561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00465255 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCCACTG ACACTCTGAG CCGAGCCGTC CCCGGGGAAG CGTCCCACAT CCGGCGACAC 
CGAGTCCGCC TCCGGATCCT CGCGCTGACG GGCGTGGCGG TCCTCCTCGT GACCGCGTAC
CTGTTCACTG ACGTGACCGG CTCCTGGGAG TACGTCGTGC AGCTCCGTAC GCGCAAACTC
GCGGCGATGC TGCTCGTGGC GGTAGCCGTA GCCACGGCGA CGGTCCTGTT CCAGACCGTT
ACGGAGAACC GCATCCTCAC TCCGGCGATC ATGGGTCTGG ACGCACTCTA TCTGCTGATT
CAGACGATGG TGGTCTACCT CTTCGGGGCG AGCGCGCTGG CCGTCACTGA CCCGGTGCTG
CGATGGACGG TCGAGATCGT CGTAATGGTC CTGTTCGCCA CCGCACTGTT TCGCTGGATC
TTCACCGGGG TGGGACGCAG CATTCACCTG CTGGTCCTGG TGGGTGTCCT CTTCGGTGTG
TTCTTTCGCA GCGTGACCCA TCTGCTGCAA CGGATGATCG ACCCGGCGGA GTTCGCGGTG
TTGCAGGACG CGTTCTTCGC GAGCTTCAGC GTGGAGGAAC GTCTCCTCGG TCTCTCCGCC
GTGACGATCA CGCTCGCCGC CGCCGCTCTC TTGCTTGTCG GCCGGCAGCT TGACGTCCTC
GTTCTCGGCC GAGCCCACGC GATCGGGCTC GGCGTGCACC ATCGGCAGCT CGTCGCGATC
GTCTTTGCCC TGGTGTCGGT CCTGGTGGCG GTCTCCACCG CGCTCGTCGG GCCGATCACG
TTCCTCGGGC TCATCGTCGC CAACCTCGCC TATCACCTCA TCGGTAGTCA CCGGCACCGG
CACACGATCC CCGCCGCCAT CCTGCTCGCG GTGATCTTCC TGGTCGGCGG CCACCTGCTG
CTCGAACGGG TATTCGACCT CGGCACCGTG CTCGCGGTCG TGATCGATTT CGTCGGCGGA
ATCTTCTTCA TCATCCTTGT CACCAGGAAG GGCACGCGGT GA
 
Protein sequence
MPTDTLSRAV PGEASHIRRH RVRLRILALT GVAVLLVTAY LFTDVTGSWE YVVQLRTRKL 
AAMLLVAVAV ATATVLFQTV TENRILTPAI MGLDALYLLI QTMVVYLFGA SALAVTDPVL
RWTVEIVVMV LFATALFRWI FTGVGRSIHL LVLVGVLFGV FFRSVTHLLQ RMIDPAEFAV
LQDAFFASFS VEERLLGLSA VTITLAAAAL LLVGRQLDVL VLGRAHAIGL GVHHRQLVAI
VFALVSVLVA VSTALVGPIT FLGLIVANLA YHLIGSHRHR HTIPAAILLA VIFLVGGHLL
LERVFDLGTV LAVVIDFVGG IFFIILVTRK GTR