Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2389 |
Symbol | |
ID | 5705825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2745912 |
End bp | 2746700 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271867 |
Product | glycosyl transferase family protein |
Protein accession | YP_001537238 |
Protein GI | 159037985 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0758603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000219352 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGTGACG AGACCGGTCA TCCGGGGGTG GGTCGGGTGC TGGTGGTGAT TCCGACCTAC AACGAGGCCG ACAACCTGAC GTGGATCGTG TCCCGGGTGC GGCAGGCGGT GCCGTCGGTG GACATCCTGG TCGCCGACGA CAACAGCCCG GATGGCACCG GCGCGGTCGC CGAGGAACTC GCCGGGCAGG ACCGGCGGGT GCACGTGCTG CACCGGGAGG GCAAGCAGGG ACTCGGGGCC GCGTACCTGG CCGGGTTCGG GTGGGCCCGG CGGCGCGGCT ACGACGCGGT GGTGGAGATG GACGCCGACG GTTCGCACGC CCCGGAGGAT CTGCCGGCGA TGCTGACCGC GGCCCGGGAC GCGGACGTGG TGATCGGTTC CCGGTGGACC AGCGGGGCGC GGGTACTCAA CTGGCCGCTG CGGCGGCTGC TGTTGTCGCG CTGCGGCAAC CTGTACGCGC GGCTGGCCCT GGGCATGCCG GTGTCCGACG CCACCGGCGG ATACCGGGTG TACCGGCTCA GCGCCCTGGA CGCGTTGGAC CTGGAGTCGG TGTGTTCCCA GGGGTACTCG TTCCAGGTGG AGCTGTCCCG GCTGGCTCAC CGGGCGGGCG TACGAATCGT GGAGGTGCCG ATCACGTTCG CGGAGCGCGA ACGGGGACGC AGCAAGATGA GCCCGCTGAT CGTCGCGGAG GCGTTGTGGC GGATCACCGG GTGGGCGGTC GCCGACCGGC GGCTGGCCCT CCGGCGGGGT ATCCACAGCA CGCCCACGGG GCAGGTCCGC TGGCCGTAG
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Protein sequence | MRDETGHPGV GRVLVVIPTY NEADNLTWIV SRVRQAVPSV DILVADDNSP DGTGAVAEEL AGQDRRVHVL HREGKQGLGA AYLAGFGWAR RRGYDAVVEM DADGSHAPED LPAMLTAARD ADVVIGSRWT SGARVLNWPL RRLLLSRCGN LYARLALGMP VSDATGGYRV YRLSALDALD LESVCSQGYS FQVELSRLAH RAGVRIVEVP ITFAERERGR SKMSPLIVAE ALWRITGWAV ADRRLALRRG IHSTPTGQVR WP
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