| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2384 |
|---|
| Symbol | |
|---|
| ID | 5705820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2739691 |
|---|
| End bp | 2741253 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641271862 |
|---|
| Product | D-lysine 56-aminomutase alpha subunit |
|---|
| Protein accession | YP_001537233 |
|---|
| Protein GI | 159037980 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0224895 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00032654 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGGA AGCTTGATCT GGATCCGGTG TTGGTGGCGC GGGCGCGGGC GTTGGCTGCC
CGGGCTGGGG CACCGGTGGT GGAGTTGGCG CGTAGCCACA CGACGGTGTC GGTGGAGCGG
GCGGTGCTGC GGTTGGCCGG GGTGCAGGGT GCGGATCCGG ATGGTATTCC GTGGGTGAAC
CGGCTGGTGG ATGCGGTGGT GGCGGATGTG GGGTTGGGGC ATGGTGTGGC GGTGCCGGTG
TTTGATGCTC TGGCGCGGGA GCAGATGGCG GATGTGACGT TGCTGGCGCA GAAGGCGGCG
GCCGGGTCGG TGCGGTTCGA GGTGCCGGTG GGGCGGGCGG CGACGGCTGC GCGGCGGGCT
GCGCGGCGGG CGGTCGCGGC GGGGGTGCGG CGTATCGATC GGCGGCGGGT CGAGCGGGAG
CGGTTGGTGC GGCGGTTCGG GGATCCGGCG CGGCGGCCGT GGATCTATCT GATCGTGGCG
ACGGGGGACA TCTACGAGGA CATTCCGCAG GCGCAGGCGG CGGCCAGGGC GGGGGCGGAT
GCGATTGCGG TGATTCGGTC GACGGGGCAG TCGTTGTTGG ACTACGTGCC GGAGGGGGCG
ACTCGGGAGG GTTTCGCGGG CACGTATGCG ACGCAGGAGA ACTTCCGGTT GATGCGGGCG
GCGTTGGACG AGTCGTCGCG GGAGTTGGGC CGGTATGTGC GGTTGACGAA CTACGCGTCG
GGGCTGTGTA TGCCGGAGAT GGCGGCGTTG GCTGGCCTGG AGCGGCTGGA CATGATGTTG
AACGACTCGA TGTATGGGAT CTTGTTTCGG GACATCAACC CGATCCGTAC GTTCGTTGAT
CAGCGGTTCT CCCGACAGGT GCACGCGCGG GCGGGGATCA TCATCAATAC GGGTGAGGAC
AATTACCTGA CGACCGCCGA TGCGGTGGAC GAGGCGCACA CGGTGACGGT GTCGCAGTTG
CTCAACGAGT TCTTCGCGCA TGAGGCGGGG TTGGCTGACT GGCAGTTGGG GTTGGGGCAC
GCGTTCGAGA TCAACCCGGA TGTGCCGGAG TCGTTGCGGT TGGAGTTGGC GCACGCCTTG
CTGGCGCGGG AGTTGTTTCC GGATGCGCCG CTGAAGTGGA TGCCGCCGAC GAAGCACATG
ACGGGGGACG TGTTTCGCGG CAACCTGCTC GACGGGTTCT TCAACCTGGT GGGGGCGCTG
ACCGGGCAGG GGATTCTGTT GGTGGGGATG ATGACCGAGG CGGTGGTGAC GCCGTGGTTG
TCGGATCGGG ACATCGCGTT GCAGAACGTC CGGTATGTGT TGGGCGCCGC GGGCGGGTTG
CACGAGGATT TCGTACCTGC GTCAGGCGGG TTCATTCAGC AGCGGGCGCA TCAGGTGCTG
GGTTCGGCGG TGGAGTTGCT GGAGCGGATC GGGGAGCAGT CGTTGTTGAC GGCGATCGGC
GAGGGCACGT TCGGGATCAT GAAGCGGCCG GCGGACCGGG GTAAGGGGCT GGATGGGGTG
GCGCGGCACG AGGGCGACTA CTACAACCCG GCGGTGGAGA TCTTGGAGGG GGTGGGGTCG
TGA
|
|---|
| Protein sequence | MTGKLDLDPV LVARARALAA RAGAPVVELA RSHTTVSVER AVLRLAGVQG ADPDGIPWVN
RLVDAVVADV GLGHGVAVPV FDALAREQMA DVTLLAQKAA AGSVRFEVPV GRAATAARRA
ARRAVAAGVR RIDRRRVERE RLVRRFGDPA RRPWIYLIVA TGDIYEDIPQ AQAAARAGAD
AIAVIRSTGQ SLLDYVPEGA TREGFAGTYA TQENFRLMRA ALDESSRELG RYVRLTNYAS
GLCMPEMAAL AGLERLDMML NDSMYGILFR DINPIRTFVD QRFSRQVHAR AGIIINTGED
NYLTTADAVD EAHTVTVSQL LNEFFAHEAG LADWQLGLGH AFEINPDVPE SLRLELAHAL
LARELFPDAP LKWMPPTKHM TGDVFRGNLL DGFFNLVGAL TGQGILLVGM MTEAVVTPWL
SDRDIALQNV RYVLGAAGGL HEDFVPASGG FIQQRAHQVL GSAVELLERI GEQSLLTAIG
EGTFGIMKRP ADRGKGLDGV ARHEGDYYNP AVEILEGVGS
|
|---|
| |