Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2343 |
Symbol | |
ID | 5707971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2696938 |
End bp | 2698512 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641271821 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001537192 |
Protein GI | 159037939 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.132405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.210612 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGCTG CGGCCGAAGC CGAGACGAGT GAGGCCCGCC CGTGGACGCG AGCCCAGAAG TGGACGATCG TCGCGGCCGG TCTTGGCATG TTCATCACCC TTCACGACGT GCTGGTCGCG AATGTGGCAC TGCCCCGAAT CCAGTCCTTC TATGGTTTGC GGGAGTCCGG GCTTCAGTGG ATCGTAGCCG CATACAGCAT GGGCATGGCT GTTGCCATCA TGCCCGCAGC TACGATGGCC GATCGATTCG GTCGGCGGCG ACTGTTTCTG ACCGCGGTTG TCGTGTTCAG CCTCGCCTCG GTGGCCGCCG GGGCGACGTC CGTATTCGCC GTGATGCTGG CGGCGCGGGC GGTGCAGGGC GTGGCCTCCG CCGTCATCAC CGTCTCCGCG CTGGCCCTGG TGTCGGCGAC TTTCCCACAC AAGCGGCAGC GTTTCCGCGC TCTCGGCTTC TTCGTGGCCG TCGCCGATAT TGGTCTGGCA CTCGGCCCAC CGCTCGGTGG GTTTCTCGCC GAGAACGCGA GTTGGCGGGT TGTCTTCTTC GTCAATGTTC CGGTCGCCGT CGTGGCGGTC GGGCTCACCC TTCGATACGT CGCGGAGTCC CGTGAGTCCA CCCGCCGTGT CGTCGACCTG TTCGGGCAAC TGTTGTTCGT GGTGACCGTG GGCGCCTTCA CCTTCGCCGT GATCGATGGG CATGACCTGG GCTGGGGGTC TCCGATAATT CTTGGGGCGT TCACCGTCTT CGCCGCCGGC CTTGTTGCCT TCATCGTCCG CGAACTTCGC AGCCGGTCGC CAATGATGGA TCTGCGGCTC TTCGCCCACC GTCCCTATCG GTTGGGAATC ATGGCGATAT TCTTCGGCAT GTTCACGGTG TACGGCACGC TGTTGATTGT CACCCAGTAC TTTCAAAACG TTCGTTTGTA TTCGCCGTTA GAGGCCGGAC TGCTCATTCT GCCATCCTCA CTCGCAGCGG TGGTGTTGTC CCCGGTTGCC GGCTTTGTCG CTGCGCGACG TGGCCCCCGC CTACCTGCCC TCACCGGCCA GTTCCTCGTA GTGAGCGGGT TGGTGGTCAT GGTGGTCGGG GTGTCGGTGA GTGTGCCTGC CGTCGTGGTC GGTTTCCTGC TGCTGGGCGC CGGGCTCTCC CTGATCATCG CGCCCGTTCA GGGGTTGGCA CTGAATTCGG TGCCGGTGGA GCGGGCAGGA ATGGCCTCGG GAATCGTGGC CACCCAGCGG GGTCTCGGGT CAACAGCCGG CTACGCCGTA CTCGGCATGA TCGTCGCGGT GTGGGTCGGC ATCGCGTTGG ACAGTGACCT GTCCAGGACC ATCCCGGACC GCGACGAGCG GGCCACCGTT GTCGCCCGAA TCGTCGACAA CACCAACCCC AACGCGTTCG AGGCGGTAGT CGGGCCCGGT CGACCCATCG CCCACCCCGA TCCCGACCAA GTGACGAAGA TCCGTGCGGT CGCGGACCGT ACCTTTGTCC GGGGCATGCA GCTCAGCCTG GGATTTGCCG CCCTGGTGGC CCTGATCATA CTGGTGATCC TCTTCCGCAA CTTCCGTGCC TCCCAAGACC GCTGA
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Protein sequence | MGAAAEAETS EARPWTRAQK WTIVAAGLGM FITLHDVLVA NVALPRIQSF YGLRESGLQW IVAAYSMGMA VAIMPAATMA DRFGRRRLFL TAVVVFSLAS VAAGATSVFA VMLAARAVQG VASAVITVSA LALVSATFPH KRQRFRALGF FVAVADIGLA LGPPLGGFLA ENASWRVVFF VNVPVAVVAV GLTLRYVAES RESTRRVVDL FGQLLFVVTV GAFTFAVIDG HDLGWGSPII LGAFTVFAAG LVAFIVRELR SRSPMMDLRL FAHRPYRLGI MAIFFGMFTV YGTLLIVTQY FQNVRLYSPL EAGLLILPSS LAAVVLSPVA GFVAARRGPR LPALTGQFLV VSGLVVMVVG VSVSVPAVVV GFLLLGAGLS LIIAPVQGLA LNSVPVERAG MASGIVATQR GLGSTAGYAV LGMIVAVWVG IALDSDLSRT IPDRDERATV VARIVDNTNP NAFEAVVGPG RPIAHPDPDQ VTKIRAVADR TFVRGMQLSL GFAALVALII LVILFRNFRA SQDR
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