| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2338 |
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| Symbol | |
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| ID | 5707966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 2690505 |
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| End bp | 2691107 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641271816 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001537187 |
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| Protein GI | 159037934 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0463919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0761527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACGGTGC GTCGACTCGC CATCGACGGT GCCGTCGAAT TCACGCCCTC CGTCCACCGG
GACGAGCGAG GGTTGTTCGC GTCGCCCTAC CAGGAGCCGG CCTTCACCGC GACGTTCGGC
TGGCCGCTGT TCCCGGTACG CGACCTCAGT CACAACGTGT CGGCCCGTGG CGTGCTGCGG
GGTATCCACT TCACCTCCAC GCCACCGGGG CGAGCGAAGT ACGTCTACTG CCCGTACGGC
AAGGTGCAGG ACTTTCTCAT CGACCTGAGG GTCGGCTCGC CCACCTTCGG CTGCTGGGAC
AGCACCGAAC TCGGCGGTGA CACCTGCCGG GCGATCTACA TCCCGGTGGG GGTCGGCCAC
GCCTTCCTGT CGTTGGTGGA CGACTCCATG ATCGTGTACG CCATGTCCAA GGGCTACGTT
GCGGAGGACG AGTTGGCCAT CTCGCCGCTC GACCCGGCAC TGGGACTGCC GCTGCCCGCC
GGGATCACTC CGTTGCAGTC CGACCGGGAC CGGGCCGCCC CCACGCTGGC CGAGGCGCTG
GATCGTGGCC TGCTGAGCGA CGACGCGGTG TGCCGGGACG TGGAGGCGAA GCTATGGCAG
TGA
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| Protein sequence | MTVRRLAIDG AVEFTPSVHR DERGLFASPY QEPAFTATFG WPLFPVRDLS HNVSARGVLR
GIHFTSTPPG RAKYVYCPYG KVQDFLIDLR VGSPTFGCWD STELGGDTCR AIYIPVGVGH
AFLSLVDDSM IVYAMSKGYV AEDELAISPL DPALGLPLPA GITPLQSDRD RAAPTLAEAL
DRGLLSDDAV CRDVEAKLWQ
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