Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2294 |
Symbol | |
ID | 5705884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2635048 |
End bp | 2636172 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271772 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001537143 |
Protein GI | 159037890 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.942803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0240973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGAC AGACCACCAC AAGCACATCG TCACCGACCG AACGGGGACT GGAGGACCTC GACGCGGCAG CCCTGGCGTA CGCGGCGCGG ATCGAGGGGC TGCCGCCCGA GCGGCGTCAG GAGGCGCGCG ACGACCTGGT TCGCTTCGCC CTGCCGTTCG CCGGGCGGCT GGCCCGTCGG TACCGCGGGC GGGGGGAGCC GCTGGAGGAC CTGGAGCAGG TCGCGCGGCT CGGGTTGGTG AACGCGGTGG ATCGCTACGA CCCGGAGCGT GGCTCCTTCA CCGCGTACGC GGCGATCACC ATCGTCGGGG AGATCAAGCG TCACTTCCGG GACCGTACCT GGGGGGTGCA CGTGCCGCGT CGGCTGCGTG ACCTCATCCT CGAGGTGGGT CAGGCCACTG CGGCGCTGAC CAGCGAGTTG TCCCGGGCGC CCACGGTGGC GGAACTGGCG AGGCGGTTGG AGACTCCGGA GGAGGAGATC CTCGCGGCGT TGGAGTCGGC CGCTGGCTAC AGTCCGGCAT CGCTCAACGC TCCGGTCGGC GGCGAGAGTT CGGCTGAGTT CGGTGACCTG GTGGGGGAGT CCGACAACGC CCTGGAGTCG GTGGACGACC GGGTCACCGT CAGCGGTCTG CTGCATCGGC TGCCCTGGCG CGAACGACGG ATCCTCGCCA TGCGCTTCTA CGGCAACCAG ACCCAGGCGG AGATCGCCGC TCGCTTCGGC ATCTCCCAGA TGCACGTGTC TCGGCTGCTG TCGCGGGCGC TGACCTGGCT GCGGCAGGCG ATGCTCGCCG ACGCGCCGCC ACCGTGGCAG AACGGTGTCA CCGAGGCAGA GGCCGGCCAG CCGCGGATCT CGGTGAAGCA GAACGGTGAC CGGGTGGTCG TCGAGGTCGG TGGGGACGTC GGCCGGGACG GTGCGGACCG GTTGCGCCGG GCGATGCTCG AGGCGGTGAC CGGCCAACCG GCCGAGGTGG TCGTCGACCT GGTTGGCGCG GGTGGCGTTG ACGCTGGTGG GATCGCCGCC CTGGCGGCTG GTCGAGAGGC GGCGGCCCGT ACCGGCGTCC CCCTTCGGCT GACCCGGGTG CAACCGGCGG TGCGCCGTTC GCTCACTGCG GCCGGCCTTG CCTGA
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Protein sequence | MFGQTTTSTS SPTERGLEDL DAAALAYAAR IEGLPPERRQ EARDDLVRFA LPFAGRLARR YRGRGEPLED LEQVARLGLV NAVDRYDPER GSFTAYAAIT IVGEIKRHFR DRTWGVHVPR RLRDLILEVG QATAALTSEL SRAPTVAELA RRLETPEEEI LAALESAAGY SPASLNAPVG GESSAEFGDL VGESDNALES VDDRVTVSGL LHRLPWRERR ILAMRFYGNQ TQAEIAARFG ISQMHVSRLL SRALTWLRQA MLADAPPPWQ NGVTEAEAGQ PRISVKQNGD RVVVEVGGDV GRDGADRLRR AMLEAVTGQP AEVVVDLVGA GGVDAGGIAA LAAGREAAAR TGVPLRLTRV QPAVRRSLTA AGLA
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