| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2263 |
|---|
| Symbol | |
|---|
| ID | 5706715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2601429 |
|---|
| End bp | 2602649 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641271742 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001537113 |
|---|
| Protein GI | 159037860 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0495388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0132313 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATCG GCGTCCTGAC CTATCACTTC CCTCCAGAAC CAGCCTTCAT CCCGGGCAGC
CTCGCCGAGG AGTTGGCCCG CCGCGGCCAC GAGGTCCGGG TGCTGACCGG GTTTCCGGAC
TACCCCGGCG GGCACTCCTA CCCTGGCTGG CACCAGCGTT GGCGCCACGA GACCCACAGC
GAACGGCTGA CCGTACGGCG AGTGCCGCGC TACACCGGCC GGAACGGCTC CGTCCGCGGT
CGGGCAGCGG GCCCCCTGTC GTTCGCCGGC AGTGTGTCGC TGGTCGGCCG CCGGTTCCTC
GCCGGCATCG ATGCGCTCTA CGTCCACCAG CCGCCCCCGG CCGCCTTCGC CACCGCCAGC
CTGCTTCGGA TGCTCGGCCG AGTGCCGACC GTCGTGCACG TGCCGGACGT GTGGGCCGGC
GGTTCGGAAC CAACGGCGGG TGAGCCCAGC CGGTGGGCTG GCCGGATCGC TGGTGCGATG
GCGTGGACCT ACCGCCGAGC CGACCGGATC GTGGTCGCCG CACCCTCCCT GCGGGACCTC
GTCGTGACAG CGGGCGCCGA CCCGGATCGC GTCGAGGTGG TGCTCAACTG GACCGACGAG
CGGATCTTCC GGCCAGCCCG GCCCAGCCCG GCAGCCGGTA AACTGGTCCG TCGCGATGGC
CGCTGCGTGG TCATGTACGC CGGCACCATC GGTGCCCGGC AGGGGCTGGA GACAGCGGTA
CGGGCGGCAG CGGCCGTCGA CCGTGGGATG GATCTCGTGT TGGTCGGGTC GGGCGAGCAG
GAGCGGCGGG TGCGGGGGCT CGCCGCCGAA CTGCGTACCG ACAACGTGCG GTTCGTCGAG
CGACGCTCGC CGTTGGACAT GCCGGAGCTG TACGCGGCCG CCGACTACCA GTTGGTCATG
CTCCGGGACC TGCCCGAACT GCGCGGCACC CTCCCCGGCA AGTTGCCGAC GGCCCTGTCG
TGCGCGGCGC CGGTCATCGC CTCGGCCGGT GGCGACACCG CCGAGGTGGT GGAGCGGGCC
AGGGCCGGGC TGTCCTGCCC ACCGGAGGAA TGGGACGCGC TCGCCGACCG GTTCTGGCTG
GCCGCCACCA TTCCGCCGGC CGCCCGTGCG GAGATGGGCC GGCGGGGCCG GGAGGCGTAC
CTGCGGCAGA TGTCGATGCC CGCTGGTGTG GATCGGATCG AGCGCCTGCT GAGCGAGGCC
GTCGGCGGAC GTCGCCGGTG A
|
|---|
| Protein sequence | MRIGVLTYHF PPEPAFIPGS LAEELARRGH EVRVLTGFPD YPGGHSYPGW HQRWRHETHS
ERLTVRRVPR YTGRNGSVRG RAAGPLSFAG SVSLVGRRFL AGIDALYVHQ PPPAAFATAS
LLRMLGRVPT VVHVPDVWAG GSEPTAGEPS RWAGRIAGAM AWTYRRADRI VVAAPSLRDL
VVTAGADPDR VEVVLNWTDE RIFRPARPSP AAGKLVRRDG RCVVMYAGTI GARQGLETAV
RAAAAVDRGM DLVLVGSGEQ ERRVRGLAAE LRTDNVRFVE RRSPLDMPEL YAAADYQLVM
LRDLPELRGT LPGKLPTALS CAAPVIASAG GDTAEVVERA RAGLSCPPEE WDALADRFWL
AATIPPAARA EMGRRGREAY LRQMSMPAGV DRIERLLSEA VGGRRR
|
|---|
| |