| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2256 |
|---|
| Symbol | |
|---|
| ID | 5706742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2594231 |
|---|
| End bp | 2595466 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641271735 |
|---|
| Product | glutamate--cysteine ligase GCS2 |
|---|
| Protein accession | YP_001537106 |
|---|
| Protein GI | 159037853 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3572] Gamma-glutamylcysteine synthetase |
|---|
| TIGRFAM ID | [TIGR01436] glutamate--cysteine ligase, plant type
[TIGR03444] glutamate--cysteine ligase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0982705 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGCGT CTCCGGAGGT GGACCACGGC ACGGTCCTGA GCTCGCCCGC AGCGGCTGCG
GGCCACCTGG CCCGGATCTG CTTCAAAACC GGCCCACCTC GATGGCTCGG CACGGAACTC
GAATGGATCG TGCACGACGC CGTCGATCCC GCCCGCCCGG TCGGGGCCAG CCGGCTGCGG
GCCGCGTTGG GGCCGCACAG CCCCCGCACA CTGGATATCA CGAGCCCCGC CCAGCCGTTG
CGGTATGGCA GCTCCGTTAC GGTCGAGCCC GGCGGGCAGG TGGAGGTTTC CACCGCAACA
CACACCTCGG TCGCGGCCCT CGTCGCCGCT ACCAAAGCCG AGATCGCCCA ACTCACCGCG
CTTCTCGGCC GTGCCGGGTT GGTCCTCGGT GCCGGTGGCA TCGACGCCCA CCGGTCACCA
CGTCCCATGT TCGAAACCCC GCGGTACCGC GCGATGCGTC GTGTCTTCGA CCGCCGCGGC
CCAGCCGGCC GCAGGATGAT GTACAGCACC GCCGGCCTCC AGATCTGCCT GGACGTCGGC
GAGGCGGACC AACTCGCCGA CCGGTGGGCC ACCGCACATG CGATCGGCCC GCCCCTGCTC
GCCGCGTTCG CCACCGCGGG GCGGCACGCC GGGCGACCGA CCGGTTGGGT CTCGGCCCGG
ATGGCCGCGT GGCTCGCCAT CGATCCGGCC CGGACCCGGG CGGTGTGGAC GCCCGAGCAG
GACGACACGG ATCCCATCGC CAGCTGGACG GAGTACGTAC TCGCTGCCCC GCTGCTCTGC
CTGCGTGGCG GTGGGTCGGA CTGGACCACC CCGGACGGTG TCACCTTCGC CGACTGGCTC
GCGGGCGCAC TGCCCCAGCC ACCCACCATC GACGATCTCG ACTATCACGT GAGCACGCTC
TTTCCGCCGG TACGTCCGCG CGGATACCTG GAGCTGCGGT ATCTCGACGC CCAACCGGGA
GAGAGCTGGT CCGTGCCCGT GGCGGTGGTC GCCGCGCTGC TCTCCGAGCC GGCCATCACC
CGCGCGGCCC GATCGTTGGT CGGGGCGCAG GCGCAGCGGT GGATCGCCGC CGCCCGGCAC
GGCCTACGCG ACGACGGTCT CGCGGTGACG GCCGCCGACC TTTTCGATCT GGCGCTGACC
GTGTTGCCCC GGCTGGGGCT GCCGCCCGCG CTGTACGACG ACATCGACCG AGGTGTACGA
CGGCGGCGGG AGGCCGCAGG ACGGAGGCGA CGGTGA
|
|---|
| Protein sequence | MVASPEVDHG TVLSSPAAAA GHLARICFKT GPPRWLGTEL EWIVHDAVDP ARPVGASRLR
AALGPHSPRT LDITSPAQPL RYGSSVTVEP GGQVEVSTAT HTSVAALVAA TKAEIAQLTA
LLGRAGLVLG AGGIDAHRSP RPMFETPRYR AMRRVFDRRG PAGRRMMYST AGLQICLDVG
EADQLADRWA TAHAIGPPLL AAFATAGRHA GRPTGWVSAR MAAWLAIDPA RTRAVWTPEQ
DDTDPIASWT EYVLAAPLLC LRGGGSDWTT PDGVTFADWL AGALPQPPTI DDLDYHVSTL
FPPVRPRGYL ELRYLDAQPG ESWSVPVAVV AALLSEPAIT RAARSLVGAQ AQRWIAAARH
GLRDDGLAVT AADLFDLALT VLPRLGLPPA LYDDIDRGVR RRREAAGRRR R
|
|---|
| |