Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2253 |
Symbol | |
ID | 5706739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2590245 |
End bp | 2591687 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641271732 |
Product | LVIVD repeat-containing protein |
Protein accession | YP_001537103 |
Protein GI | 159037850 |
COG category | [S] Function unknown |
COG ID | [COG5276] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.613377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGAT CCTGCACGCC GCGGTCCCGC TGGCTCGTTA CCCTGAGCCT GGCCACGACC GGCCTTCTCC TTACCAGTCT GGTCGCCGCA GCGCCCCGCG ATGCCAGGGC GGCCACCACC GAATCGGGCG CCGTCAGCGC CGCGGACATC CCCGGGGTTG ACGAGATCCG CAGTAGCCCC AACCTGAAAC TGGTCGTCAA CCTGCCAAAG GAGACGCCAC TCGACGCCAC GAACAGCGAC CTCGCCTTCC AGGGCCGGTA CGCCTTCGCC GGCAACTACA ACGGCTTCGT CATCTACGAC ATCTCGCGTC CGACCGCACC GACCGTCGTC TCGCAGGTGC TCTGCCCGGG TTCGCAGAAC GACATCTCTG TCCACGGTGA CCTGCTGTTC CTTTCCACCG ACTCGCCCCG CAGCGACGAC TCGTGCGACA GCACCAGGGT GCCGTCGACC GAGACCCGGT GGGAGGGCAT CAAGATCTTC GACATCAGTG ACAAGGCCAA CCCGCGCTAC CTGAAGAGCG TGCAGACCGC CTGCGGCTCA CACACCCACA CGCTGGTGCC GGGCAAGAAC CGCAGGACGA TGTACATCTA CGTCTCGTCG TACGGCCCAT CGGACACGTA CGTCGGCTGC CCGCCGCCGC ACGACTCGAT CTCCATCGTC AAGGTGCCGG TGCACCGGCC CACCGAGGCA GCGGTGGTGG CCACACCGAA CCTGTTCCCC GACGGCGGCT TCGAGGGCGT GCCGGGGCAG AAGTCGGCGA CCAGCGGTTG CCACGACATC ACCGCCTACC CGTCGAAGAA TCTGGCCGCC GGTGCCTGTA TGGGTGACGG CATCCTGATG GACATCTCGA ACCGGGAGGC GCCCCGAGTC ATCAACAGGG TCCGGGACAC AGAGAACTTC GCCTTCTGGC ACTCAGCCAC CTTCAACAAC GCCGGCACCA AGGTGGTCTT CACCGATGAG CTGGGTGGTG GCGGCGGCGC CACCTGCAAC GAAACCATCG GCCCCAACCG GGGCGCGGAC GCGATCTACG ACATCGTCGG TCGCGGTAAA CACCGCACGA TGGTCTTCCG CAGCTACTTC AAGATCCCTC GGGAGAACGC CGACACCGAG AACTGTGTGG CGCACAACGG CTCGCTGATC CCCGTGTTCG GGCGCGACAT CATGGTCCAG GCGTGGTACC AGGGCGGCAT CTCGGTGTGG GACTTCACCA ACTCGGCCAA TCCCCGCGAG ATCGCGTACT GGGAGCGGGG TCCGCTGGAC GCGGAGCGCC TCATAACCGG CGGCTCCTGG TCCGCGTACT GGTACAACGG CTACATCTAC TCCAACGACA TCGCCAAGGG CCTCGACGTC CTCAAACTCA CCGACCGGCG CACCTGGACG GCCAACCTCG TCCGCTACCG GGAGCTGAAC GTACAGACCC AGTCCGGCCG CTTCGGCCGG TAG
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Protein sequence | MSRSCTPRSR WLVTLSLATT GLLLTSLVAA APRDARAATT ESGAVSAADI PGVDEIRSSP NLKLVVNLPK ETPLDATNSD LAFQGRYAFA GNYNGFVIYD ISRPTAPTVV SQVLCPGSQN DISVHGDLLF LSTDSPRSDD SCDSTRVPST ETRWEGIKIF DISDKANPRY LKSVQTACGS HTHTLVPGKN RRTMYIYVSS YGPSDTYVGC PPPHDSISIV KVPVHRPTEA AVVATPNLFP DGGFEGVPGQ KSATSGCHDI TAYPSKNLAA GACMGDGILM DISNREAPRV INRVRDTENF AFWHSATFNN AGTKVVFTDE LGGGGGATCN ETIGPNRGAD AIYDIVGRGK HRTMVFRSYF KIPRENADTE NCVAHNGSLI PVFGRDIMVQ AWYQGGISVW DFTNSANPRE IAYWERGPLD AERLITGGSW SAYWYNGYIY SNDIAKGLDV LKLTDRRTWT ANLVRYRELN VQTQSGRFGR
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