Gene Sare_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2253 
Symbol 
ID5706739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2590245 
End bp2591687 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content66% 
IMG OID641271732 
ProductLVIVD repeat-containing protein 
Protein accessionYP_001537103 
Protein GI159037850 
COG category[S] Function unknown 
COG ID[COG5276] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.613377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAT CCTGCACGCC GCGGTCCCGC TGGCTCGTTA CCCTGAGCCT GGCCACGACC 
GGCCTTCTCC TTACCAGTCT GGTCGCCGCA GCGCCCCGCG ATGCCAGGGC GGCCACCACC
GAATCGGGCG CCGTCAGCGC CGCGGACATC CCCGGGGTTG ACGAGATCCG CAGTAGCCCC
AACCTGAAAC TGGTCGTCAA CCTGCCAAAG GAGACGCCAC TCGACGCCAC GAACAGCGAC
CTCGCCTTCC AGGGCCGGTA CGCCTTCGCC GGCAACTACA ACGGCTTCGT CATCTACGAC
ATCTCGCGTC CGACCGCACC GACCGTCGTC TCGCAGGTGC TCTGCCCGGG TTCGCAGAAC
GACATCTCTG TCCACGGTGA CCTGCTGTTC CTTTCCACCG ACTCGCCCCG CAGCGACGAC
TCGTGCGACA GCACCAGGGT GCCGTCGACC GAGACCCGGT GGGAGGGCAT CAAGATCTTC
GACATCAGTG ACAAGGCCAA CCCGCGCTAC CTGAAGAGCG TGCAGACCGC CTGCGGCTCA
CACACCCACA CGCTGGTGCC GGGCAAGAAC CGCAGGACGA TGTACATCTA CGTCTCGTCG
TACGGCCCAT CGGACACGTA CGTCGGCTGC CCGCCGCCGC ACGACTCGAT CTCCATCGTC
AAGGTGCCGG TGCACCGGCC CACCGAGGCA GCGGTGGTGG CCACACCGAA CCTGTTCCCC
GACGGCGGCT TCGAGGGCGT GCCGGGGCAG AAGTCGGCGA CCAGCGGTTG CCACGACATC
ACCGCCTACC CGTCGAAGAA TCTGGCCGCC GGTGCCTGTA TGGGTGACGG CATCCTGATG
GACATCTCGA ACCGGGAGGC GCCCCGAGTC ATCAACAGGG TCCGGGACAC AGAGAACTTC
GCCTTCTGGC ACTCAGCCAC CTTCAACAAC GCCGGCACCA AGGTGGTCTT CACCGATGAG
CTGGGTGGTG GCGGCGGCGC CACCTGCAAC GAAACCATCG GCCCCAACCG GGGCGCGGAC
GCGATCTACG ACATCGTCGG TCGCGGTAAA CACCGCACGA TGGTCTTCCG CAGCTACTTC
AAGATCCCTC GGGAGAACGC CGACACCGAG AACTGTGTGG CGCACAACGG CTCGCTGATC
CCCGTGTTCG GGCGCGACAT CATGGTCCAG GCGTGGTACC AGGGCGGCAT CTCGGTGTGG
GACTTCACCA ACTCGGCCAA TCCCCGCGAG ATCGCGTACT GGGAGCGGGG TCCGCTGGAC
GCGGAGCGCC TCATAACCGG CGGCTCCTGG TCCGCGTACT GGTACAACGG CTACATCTAC
TCCAACGACA TCGCCAAGGG CCTCGACGTC CTCAAACTCA CCGACCGGCG CACCTGGACG
GCCAACCTCG TCCGCTACCG GGAGCTGAAC GTACAGACCC AGTCCGGCCG CTTCGGCCGG
TAG
 
Protein sequence
MSRSCTPRSR WLVTLSLATT GLLLTSLVAA APRDARAATT ESGAVSAADI PGVDEIRSSP 
NLKLVVNLPK ETPLDATNSD LAFQGRYAFA GNYNGFVIYD ISRPTAPTVV SQVLCPGSQN
DISVHGDLLF LSTDSPRSDD SCDSTRVPST ETRWEGIKIF DISDKANPRY LKSVQTACGS
HTHTLVPGKN RRTMYIYVSS YGPSDTYVGC PPPHDSISIV KVPVHRPTEA AVVATPNLFP
DGGFEGVPGQ KSATSGCHDI TAYPSKNLAA GACMGDGILM DISNREAPRV INRVRDTENF
AFWHSATFNN AGTKVVFTDE LGGGGGATCN ETIGPNRGAD AIYDIVGRGK HRTMVFRSYF
KIPRENADTE NCVAHNGSLI PVFGRDIMVQ AWYQGGISVW DFTNSANPRE IAYWERGPLD
AERLITGGSW SAYWYNGYIY SNDIAKGLDV LKLTDRRTWT ANLVRYRELN VQTQSGRFGR