| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2250 |
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| Symbol | |
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| ID | 5706736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 2586755 |
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| End bp | 2588479 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641271730 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001537101 |
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| Protein GI | 159037848 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.460178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.714612 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCCAG ATCCATCTGC CGAACCGTCC ACTGACGACG AGGCAACCGC CTTCGTCGAC
CTGGGCCTGC GCGACGAGCT ACTCGCTGCG CTCGCCGCGC TCGGCTACGA GGAGCCGACG
CCGATCCAGC GGGAGGCCAT CCCTCCCCTG CTCGCCGGAC GGGACCTCCT CGGCCAGGCC
GCCACGGGTA CCGGCAAGAC TGCCGCGTTC GCCCTGCCGC TGCTGCAACG GATGTCGGTC
GACCGGCCGA CCGGTGACCC GGTGGCGCTG GTGCTGGTGC CCACCCGTGA GCTGGCAGTG
CAGGTCTCCG AGGCGTTCCA CCGGTATGGT AAGGAACTTG GCACGCGGGT GCTGCCGATC
TACGGCGGGC AGCCGATCGG TCGGCAACTA CGCGCCCTGG ACTCTGGGGT GGACGTCGTG
GTGGCCACGC CCGGCCGAGC GCTCGACCAC ATCGCCCGTG GCACGCTCCG CCTGGGTGAT
GTCGGCACCG TCGTGCTGGA CGAGGCCGAC GAGATGCTGG ACATGGGCTT CGCCGAGGAC
ATCGAGGCGA TCCTGGAGCA CGCGCCAGAG CAGCGACAGA CCGTGCTGTT CTCGGCGACC
ATGCCGGCGC GAATCGACGG AATGGCCCGA GCTCACCTGA CCGATCCGAT CCGCATTCTC
ATCGCCCGGG AACAGCCGGT GGCCGGCGAG GCACCCCGGG TACGGCAGAG TGCGTACCTG
GTGGCGCGGG CGCACAAACC CGCCGCCCTG GGCCGGGTGT TGGATATCGA GTCCCCTACC
GCAGCGATCG TCTTCTGTCG CAGCCGGGAG GAGGTCGACC GGCTCACCGA GACAATGAAC
GGTCGCGGTT ACCGAGCCGA GGCACTGCAC GGCGGGATGA GTCAGGAGCA GCGGGACCGG
GTGATGGGCC GGCTGCGCGC CGGCACCGCC GATCTGTTGA TGGCCACCGA CGTGGCGGCG
CGGGGCCTGG ACGTCGAGCA GCTCAGCCAC GTCGTCAACT ACGACGTCCC GTCCGCACCC
GAATCGTACG TACACCGGAT CGGCCGGGTG GGGCGGGCTG GCCGGGAGGG CGTGGCTATC
ACCCTCGCCG AGCCACGGGC ACATCGGATG CTGAAGACCA TCGAACGGGT CACCGGCCAA
CGGATCACCA TCGACAAGAT CCCCACGGTG GCGGACCTGC GCAATCGTCG GTTGGAACTC
ACCCAGGCAG CGCTTCGGGA GAGCCTGCTG GAGGACGACC TGGAGCCGTT CCGGGTGATC
GTCGAGTCGC TGAGCGACGA GTTCGACCTC ATGGAGGTGG CCCTCGCCGC GGTACGCCTG
GCCCACGAGG CGACCCTGCC GGGAGCCCTG GACGAGGAGG AGGAGATCCC GCAGGTCTCG
GTCCGCCCGT CCCGGACCGG CCGGCCGGGA CCCGAGGGCC GAGGCGACCG CCGGTCGGGC
CGACCCCGGG GAACGGGCAC CACACAGGTT TTCGTCGGGC TGGGCCGGCG TGCCGGAGTC
CGACCGCAGG ATCTGGTCGG CGCGATCACC GGCGAGACCG GCATGAACGG ACGAGACATC
GGCTCGATCG AGATCGCAGA CCGCTTCTCG CTGGTGGAGG TGCCGGCTGG GCTGGCCGAC
GAGGTGATCA CCGGCCTGCG CGGCAGCACC ATCAAGGGCC GCCGGGCGAC CGTTCGCCGC
GACCGTGACA CCGACGGCGG TGACCGCCGC CGGCAGCGCC GCTGA
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| Protein sequence | MRPDPSAEPS TDDEATAFVD LGLRDELLAA LAALGYEEPT PIQREAIPPL LAGRDLLGQA
ATGTGKTAAF ALPLLQRMSV DRPTGDPVAL VLVPTRELAV QVSEAFHRYG KELGTRVLPI
YGGQPIGRQL RALDSGVDVV VATPGRALDH IARGTLRLGD VGTVVLDEAD EMLDMGFAED
IEAILEHAPE QRQTVLFSAT MPARIDGMAR AHLTDPIRIL IAREQPVAGE APRVRQSAYL
VARAHKPAAL GRVLDIESPT AAIVFCRSRE EVDRLTETMN GRGYRAEALH GGMSQEQRDR
VMGRLRAGTA DLLMATDVAA RGLDVEQLSH VVNYDVPSAP ESYVHRIGRV GRAGREGVAI
TLAEPRAHRM LKTIERVTGQ RITIDKIPTV ADLRNRRLEL TQAALRESLL EDDLEPFRVI
VESLSDEFDL MEVALAAVRL AHEATLPGAL DEEEEIPQVS VRPSRTGRPG PEGRGDRRSG
RPRGTGTTQV FVGLGRRAGV RPQDLVGAIT GETGMNGRDI GSIEIADRFS LVEVPAGLAD
EVITGLRGST IKGRRATVRR DRDTDGGDRR RQRR
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