| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2239 |
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| Symbol | |
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| ID | 5705865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 2575261 |
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| End bp | 2576265 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641271719 |
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| Product | transketolase central region |
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| Protein accession | YP_001537090 |
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| Protein GI | 159037837 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0788664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.171519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCA CGACCATGGC GAAGGCACTC AACGCCGCGC TCGCCGACGC GATGCTCGAG
GACGATCGGG TGCTCGTGTT CGGCGAGGAC GTCGGCCAAC TCGGCGGGGT CTTCCGGATC
ACCGACGGGC TGGCGGCCCG CTTCGGCGAC AAGCGCTGTT TCGACACTCC GCTCGCCGAG
GCCGGCATCG TCGGTTTCGC GGTCGGCCTG GCCATGTCAG GTCTGCGGCC GGTGGTGGAG
ATGCAGTTCG ACGCGTTCGG GTACCCGGCG TTCGAACAGA TCGCCTCGCA TGTGGCGAAG
CTGCGCAACC GCACCCGCGG CGCGTTGACC GCGCCCATCG TCATCCGGAT CCCGTACGCC
GGGGGCATCG GCGGGGTGGA GCACCACTGT GACTCCTCCG AGGCGTACTA CGCGCACACC
CCCGGCCTGA AGGTCGTCGC CCCGGCCACT GTGGCCGACG CCTACTCGCT GCTGCGCGAG
GCGATCGACG ACCCGGACCC GGTCGTGTTC CTGGAGCCGA AGAAGCTCTA TTTCGCCAGC
GCCGAGGCGC AACTGCCGGC CCGGACCGAA CCGTTCGGCC GTGCCGCCGT ACGCCGTCCC
GGCGCCGGCG CCACCCTGGT CGCGTACGGA CCGGCGGTGC CGGTGGCACT GGAGGCCGCC
GAGGCGGCCC GGGAGGAGGG CTGGGACCTC GAGGTCGTCG ACGTGCGCAC GATCGTGCCG
TTCGACGACG ACACGATCGC GGCTTCGGTG CGGAAGACGG GTCGGTGCGT GGTGGTCCAG
GAGGCTCAGG GTTTCGCCGG GGTCGGCGCG GAGATCGCCG CCCGGGTGCA GGAGCGCTGC
TTCCACTCTC TGCACGCCCC GGTGCTGCGG GTGTCCGGGC TGGATATCCC GTATCCCGCG
CCGATGCTGG AGCATACCCA CCTGCCGTCG GTGGATCGGG TGCTCGACGC CGTGGCCCGC
CTCCAGTGGG ACGACCAGCC CGACGAGCGA TGGGTGGCGG CCTGA
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| Protein sequence | MASTTMAKAL NAALADAMLE DDRVLVFGED VGQLGGVFRI TDGLAARFGD KRCFDTPLAE
AGIVGFAVGL AMSGLRPVVE MQFDAFGYPA FEQIASHVAK LRNRTRGALT APIVIRIPYA
GGIGGVEHHC DSSEAYYAHT PGLKVVAPAT VADAYSLLRE AIDDPDPVVF LEPKKLYFAS
AEAQLPARTE PFGRAAVRRP GAGATLVAYG PAVPVALEAA EAAREEGWDL EVVDVRTIVP
FDDDTIAASV RKTGRCVVVQ EAQGFAGVGA EIAARVQERC FHSLHAPVLR VSGLDIPYPA
PMLEHTHLPS VDRVLDAVAR LQWDDQPDER WVAA
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