| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2224 |
|---|
| Symbol | |
|---|
| ID | 5703905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2560684 |
|---|
| End bp | 2561283 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641271704 |
|---|
| Product | rhodanese domain-containing protein |
|---|
| Protein accession | YP_001537075 |
|---|
| Protein GI | 159037822 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.335069 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCC CCGGGAACGC CTGCCCCGCC ACCCTCGACA CCGCCCAGCT ACGGGAACTC
ATCGACTCGG GCCGCGCCCC GCGCCTGCTC GACGTGCGCA CCCCGGCCGA ATTCGAGAGC
GCACACATCC CCGGCGCCTA CAACGTGCCC CTCGACCTGC TGAAGGAGCA TCGCGAGGAG
CTGCGCGGCC ACCTCGACGA CGACGTGGTG CTGATCTGCC GCTCGGGGGC CCGGGCCGCC
CAGGCCGAGC GGACACTCGC CGGGGTGGGT CTACCGAACG TGAAGGTCCT GACCGGCGGC
ATGCTGGCCT GGCAGACCGC TGCCGGTCCC GCCACGCGGG GCACCCCCCG GTGGGACCTG
GAACGGCAGG TCCGGCTGGC CGCCGGCACT GTCGTGTTGG CCAGCATCGT GGCCTCGGTG
TTCGTACCCG GCGCCGAGTG GGTGGCCGGC GTCATCGGCG CGGGCCTCAC CTTCGCCGCA
CTCAGCAACA CCTGTGCGCT GGGCATGCTG CTGAGCAAGC TGCCGTACAA CCGCAACGCA
AGCTGTGACC TGGACACTGT CATCGATCAA CTAGGCGCAC CCACCGGAGG GCGATCGTGA
|
|---|
| Protein sequence | MTIPGNACPA TLDTAQLREL IDSGRAPRLL DVRTPAEFES AHIPGAYNVP LDLLKEHREE
LRGHLDDDVV LICRSGARAA QAERTLAGVG LPNVKVLTGG MLAWQTAAGP ATRGTPRWDL
ERQVRLAAGT VVLASIVASV FVPGAEWVAG VIGAGLTFAA LSNTCALGML LSKLPYNRNA
SCDLDTVIDQ LGAPTGGRS
|
|---|
| |