Gene Sare_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2220 
Symbol 
ID5703901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2556411 
End bp2557553 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content67% 
IMG OID641271700 
Productfatty acid desaturase 
Protein accessionYP_001537071 
Protein GI159037818 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.168713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.151615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCA TCCAACGTAA GCCCGTCAAC CCGATCGCGC ACCTCACTGC CGAGGACATC 
GTGGTGATCG GCAAGGAACT CGACGCGATC CGGGACCGGG TCATGGCCGA CCTGGGGGAG
CGGGACGCCC GCTACATCCG CCGACTCATC CGCACGCAGC GGAGCCTGGA GCTGGGCAGT
CGGGCGGTGT TGCTCTTCTC GCTGTTTCCG CCGGCCTGGA TCGTGGGCAC GGCCGGCCTG
TCGGTCGCCA AGATTCTGGA GAACATGGAG ATCGGGCACA ACGTCCTGCA CGGTCAGTGG
GACTGGATGC GCGACCCGAA GATCCACTCC ACCACCTGGG AGTGGGACCA CGTCTCCCCG
GCCGACCAGT GGAAGCACTC GCACAACGAG CTGCACCACC GCTACACCAA CGTCGTCGGC
AAGGACAACG ACCTCGGGTA CGGCATCATG CGGGTCGACG AGGACCAGCC TTGGCACCCG
CTCCATCTGG GCCAGCCGTT GTGGAACCTG CTCAACGCCT GCTTCTTCGA GTACGGCATC
GCCGCGTACG ACCTGGAACT GGGGCGCAAC CTGAAGGAGG GCCGGCACCG GGATCCGGAG
TTCCGCGCTC GGGCCCGAGC GGTCGGCCGC AAGATCCGCC GGCAGGTTCT GAAGGACTAC
GTGCTGCACC CGCTGCTGTC GGGGCCATCG TTCCTGAGCA CGCTCGCCGC GACGTTCACC
GCGAACCTGG TCCGTAACCT GTGGAGCCAC TCGGTGATCA TGTGCGGGCA CTTCCCGGAG
GGCGTGGAGA CCTTCGAGAA GACCTCGATC GAGGGGGAGT CCCGTGGCGA GTGGTACCTG
CGGCAGATGC TCGGCTCGGC GAACATCAGC GGCAGCCGGT TGCTGCACAT CATGTCCGGC
AACCTGTCCC ACCAGATTGA ACATCACCTC TTTCCGGACC TGCCGAGCAA CCGCTATCGG
GAGGTTGTCC CGGAGGTCCG GGCGTTGTTC GACCGGTACG GCCTGACGTA CACCACCGGA
TCGTTGCCCC GGCAGGTCTT CTCCGCCTGG AAGAAGGTCA TCCGGCTGTC GCTGCCCAAC
CGTCGCCCGC GCGACCGGGC CGGCGACCGG GCGGCACCGG CGCTGACCGC ATCCGGCGCC
TGA
 
Protein sequence
MTVIQRKPVN PIAHLTAEDI VVIGKELDAI RDRVMADLGE RDARYIRRLI RTQRSLELGS 
RAVLLFSLFP PAWIVGTAGL SVAKILENME IGHNVLHGQW DWMRDPKIHS TTWEWDHVSP
ADQWKHSHNE LHHRYTNVVG KDNDLGYGIM RVDEDQPWHP LHLGQPLWNL LNACFFEYGI
AAYDLELGRN LKEGRHRDPE FRARARAVGR KIRRQVLKDY VLHPLLSGPS FLSTLAATFT
ANLVRNLWSH SVIMCGHFPE GVETFEKTSI EGESRGEWYL RQMLGSANIS GSRLLHIMSG
NLSHQIEHHL FPDLPSNRYR EVVPEVRALF DRYGLTYTTG SLPRQVFSAW KKVIRLSLPN
RRPRDRAGDR AAPALTASGA