| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2199 |
|---|
| Symbol | |
|---|
| ID | 5708194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2532598 |
|---|
| End bp | 2533311 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641271680 |
|---|
| Product | HxlR family transcriptional regulator |
|---|
| Protein accession | YP_001537051 |
|---|
| Protein GI | 159037798 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.69891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGAGC AACGAGACCG CCGGACGTAC GGCCAGCAAT GCGGGCTGGC CGTCTCGCTG
GACATGGTGG GTGAACGGTG GACCCTGTTG ATCATTCGTG AGCTGCTGGT GCGGCCGCGT
CGCTACCGCG ACCTGCTGGA CGCGCTGCCC GGCATCGGCA CCAACCTGCT GGCCGACCGA
CTGGCCTTCC TCACCGAGGC AGGAATAGTC CAGCCACTCG ATGCCGAGCG CCGCACGGCC
GGCTACGCGC TCACCGAGCT GGGCAAAGAG CTGCGGGAGC CGGTTCTGGC CCTGGCCCGC
TTCGGCCTGA CTCTCCTCGC CGAACAGCCG GGCCACCTGC CGACCTCGGT CACCCGCGCC
TCGTGGGCCG CGCTGGCCAT CGAGTCCATG GTTGATTCGA CTCGGACGCT CGTCGACGAG
GTCTACGAGT TCGACATCGA GGGCGAGGTG TTCCACGTTC GGATCAGCAA CGGTGAGGCC
CGGACGGCGC CCGGTGCGGC CGGCGCGGAC GCCACCCTCC GGGTGGTCAC CGACGCGAGG
ACATTCTTCG ACCTTGGCGG GGGCGTGATC GAGCCGGTCG AGGCGGTCGT CAGCGGCGCG
GTGTCGGTGA CCGGCCCGCC CGCGGCCCTT CCCCGCTGCC TGTTCCTACT CGGTCTGGGC
GGCCGACCGA GTGGTGATCG CGTGCTTTCA GCAGCGGAGA GCGCCGGGCG CTGA
|
|---|
| Protein sequence | MKEQRDRRTY GQQCGLAVSL DMVGERWTLL IIRELLVRPR RYRDLLDALP GIGTNLLADR
LAFLTEAGIV QPLDAERRTA GYALTELGKE LREPVLALAR FGLTLLAEQP GHLPTSVTRA
SWAALAIESM VDSTRTLVDE VYEFDIEGEV FHVRISNGEA RTAPGAAGAD ATLRVVTDAR
TFFDLGGGVI EPVEAVVSGA VSVTGPPAAL PRCLFLLGLG GRPSGDRVLS AAESAGR
|
|---|
| |