| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2197 |
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| Symbol | |
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| ID | 5708192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 2529732 |
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| End bp | 2531624 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641271678 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001537049 |
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| Protein GI | 159037796 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family
[COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.774056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGGA CCGAGGACGA GCTCCGCATT CAGATCCTCG GTCCTGTCCA GGCGACCATC
CGCGGTGACG CGGTCGACCT GGGCCCTCCC AAACAGCGGG CGGTTCTCGC CCTGCTGGCC
CTGCGGGCCG GCGGGCACGT GCCGCTCGAC GATCTGATCG CCGCGCTCTG GGCGGGACAG
CCACCGGCCC GGGCGGCCAA TCTGGTGCAC ACCTACGTCG CCCGCCTGCG CCAGACGCTG
GAGCCGGACA CGCCACGTCG GCGGCGGACC AACGTCATCG CATCGGTGCC GGGCGGGTAC
CGGTTGGCTG TCGGCGCGGA GCAGCTCGAC CTGCACGCGT TCCGTGCCGG AGTCCGGGAG
GCTGCGGCCC TACGCGAGCG CGGCGAGCCG ACCAGGGCCT TCGCCCGCTT CGGGGAGAGC
GTCGGCCGGT GGCGGGATCC ACAGGTCGGC GACCTGGCCG CGCTCCTGGT CGAGCAGGAC
GACCTCGGTC CACTGCGGCA GGAGTTCCTG GCCGCGGCGC TCACCTATGT CGGCCTCGGC
CTGGATCTGG GCCGACCGGA GGCGATCCTG CACCTCGCCG AACGGCTGGC GCTGACCGAG
CCGCTCAACG AAAGGGTGCA GGCCCGGCTG TTGCAGACGC TGGCACGAAT CGGCCAGCGC
GCCTGGGCCA TCGAGCGCTA TGCCGAGGTC CGCGAGCGAC TCCGGCTCGA CCTCGGCGTG
GACCCGGGGC CCGAGCTGTC CGCGGCGTAC CGCGAGGTGT TGGATGCCGA GCTGATGTCG
TCCGATACCG CCCACCGGAC CTCGCCCCAG GTGCCACCGT GGCGGGGAAC GGTGCCCCTG
ATCGATGAAC TGACCGGTCG TTCGGCTGAC CTTACCGCGA TCAACGACCT GCTCGACGGG
TACCGGCTGG TGAGCCTTAC CGGCCCGGCT GGGGTGGGCA AGTCCGCGCT CGGCCTGGCC
GCCGCGGAGC GGCAGCGAAA GCGGCACGCC GACGGCGTGG CGGTGGTCGA CGTGACGAAC
GTCCGCACCG GACACGCCCT CACGCAGGCG GTGACCGCGG TCGTCGTCAA CGGTCCACTG
CAGGCAACGG GTACACCCGT GTCCCTGGTG CGCCAGTTGC ACGACCGAAG CCTGCTGCTT
GTGATCGACA ACGCCGAGTT GGTCACCGAC GAGGCGGCAG AGCTGACAGA CGAGTTGCTC
CGCGAATGTC CCGGACTCAC CGTCCTGTTG ACCTCCCGGG AGCTACTCGG GATGCGGTAC
GAGGCGGTGT ATCCGGTCCG GCCGTTGCGA ACCGACCCCG CACCGGGGAC GTCCGCGCCT
CCGCCCGCCC AACAGTTGTT CGCCCGGCGG GCCACGCAGG TGCAGCCGAG CTTCCGGCTC
GACGAGTCCA CCCTGCCCGG GGTCACCGCG GTGTGCCGGG CGCTCGACGG CCTCCCGCTC
GCCATCGAGC TGGCCGCGGC GTGCCTGCGC ACCCAACGGC TGGACACCCT GGTTGACGTC
GTGGCTGATT CGCTGCGCTG GCTCCAACCA CCGCGACGGG GGGTGCCGAG ACACCATCGG
TCGCTACGGG CCGCCGTGCA CCGCAGCATC GAACTGCTCG ACGCGGCGGA GCAGCGGTGT
TTCGCCGCGC TCGGGGCGAT GCCGGCCGAG TTCGACCTCG CGGCCGCTGC CAGCGCCAGC
GGCGCACTGG TCGGTGAACG CGCTGCGGTG CAGGTACTCC TGGATCGATT GGTCGACAAG
TCGGTACTGG AGGTCCGGCA CGGTCCGGCC GGGAGGCAGT ACCGCATGCT CGGGACGGTT
CGCGCAATGG CCCGACAGCT ACTCCAGGAG CAGGGCTCGA TCGGGGCATC TCCCTCGACC
CGGTGCGCGT GCGCCTGCCA CCTGGACCCC TGA
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| Protein sequence | MNRTEDELRI QILGPVQATI RGDAVDLGPP KQRAVLALLA LRAGGHVPLD DLIAALWAGQ
PPARAANLVH TYVARLRQTL EPDTPRRRRT NVIASVPGGY RLAVGAEQLD LHAFRAGVRE
AAALRERGEP TRAFARFGES VGRWRDPQVG DLAALLVEQD DLGPLRQEFL AAALTYVGLG
LDLGRPEAIL HLAERLALTE PLNERVQARL LQTLARIGQR AWAIERYAEV RERLRLDLGV
DPGPELSAAY REVLDAELMS SDTAHRTSPQ VPPWRGTVPL IDELTGRSAD LTAINDLLDG
YRLVSLTGPA GVGKSALGLA AAERQRKRHA DGVAVVDVTN VRTGHALTQA VTAVVVNGPL
QATGTPVSLV RQLHDRSLLL VIDNAELVTD EAAELTDELL RECPGLTVLL TSRELLGMRY
EAVYPVRPLR TDPAPGTSAP PPAQQLFARR ATQVQPSFRL DESTLPGVTA VCRALDGLPL
AIELAAACLR TQRLDTLVDV VADSLRWLQP PRRGVPRHHR SLRAAVHRSI ELLDAAEQRC
FAALGAMPAE FDLAAAASAS GALVGERAAV QVLLDRLVDK SVLEVRHGPA GRQYRMLGTV
RAMARQLLQE QGSIGASPST RCACACHLDP
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