Gene Sare_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2154 
Symbol 
ID5706972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2477212 
End bp2478243 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content70% 
IMG OID641271639 
Product3-oxoacyl-(ACP) synthase III 
Protein accessionYP_001537010 
Protein GI159037757 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.172601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.128926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGCG ATCCAGTTCA GTTCGGAATC CGGAACTTCG GGTACGCGTT CGGAGAGGAC 
CAGGACGTGG CGCAGGTCGC CGGCGACTAC GTCGACGACC CGGAGCGGAT CATCCGGTGG
GGTTACCGCA CCTTCCATCG GGCACCGGAG GGTGTCACCG CGACGGACCT CGCGGCCGAC
GCCGCCCGCA AGGCACTCGC CGGGGCCGAC CTGGCCGCCG ACGACGTGGA CCTGATCGTC
CTGGCCACCT CCGAGATGCC CGAGTACCCG CACTGGGACT CCTCGGCGGC GTTGGCCCGC
AAGCTCGGCC GTACGAGGGC CCAGACGCTC CTCCTCACCG AGGGCTGCGC GTCGGGGGTC
ACCGGCCTGG GCGTCGTCGC CGGGCTGATG GCCGTCCAGC CGGAGATCAA CACGGTGTTG
TTCGTGGCCG TCAACCGGGT CAGCGAGTTC CACCGCAACC GGATGAAGGT CAACAACGCG
GTGCACAGCG ACGGGGCGGT GGCCGCGGTG CTGCACCGGG GGCACCCGCG CAACCGGTGG
CTGGCAACCG ACCAGTTCAC CGACCCGGAC CTGTGTGACT GGTTCCGCAC CGACTACGGC
GGGGCGGTGG CGCCCGTCCC GCCGCCCGGC TGGACCAGCA CCATCGCCCC CGCCGGTCAC
GAGCGGGTGC AGGCGCACTT CGACAAGGAC CCCCGTCGGC TCGGGGACTT CGTTGACCTA
CTCAATCACC GTGTCGTCGA GGTCATCGAG GGGGCGTGCC GGCGTGCCGG GGTCGACCGG
GACGCGGTGT CACACATCAT CTACATCAAC GACAGCCCCG ATGCCATCGA CGACGTCACC
GCCCCGTTCG CGCTGCCTCG CGAGCGCAGC AACGCCGCGC TGGCCGTGGT ACACGGCCAC
ATGGGGGCGG CCGACCAGTT GGTCTGCCTC GGTCAGCACC TCGAACGCGG CGATCTCGCC
GAGGGCGATG TCGTGGCCAT GGCCGGCATC TCGATCGGGA TGCGCTGGTA CTGCACCCTG
GTCCGGGTCT GA
 
Protein sequence
MSRDPVQFGI RNFGYAFGED QDVAQVAGDY VDDPERIIRW GYRTFHRAPE GVTATDLAAD 
AARKALAGAD LAADDVDLIV LATSEMPEYP HWDSSAALAR KLGRTRAQTL LLTEGCASGV
TGLGVVAGLM AVQPEINTVL FVAVNRVSEF HRNRMKVNNA VHSDGAVAAV LHRGHPRNRW
LATDQFTDPD LCDWFRTDYG GAVAPVPPPG WTSTIAPAGH ERVQAHFDKD PRRLGDFVDL
LNHRVVEVIE GACRRAGVDR DAVSHIIYIN DSPDAIDDVT APFALPRERS NAALAVVHGH
MGAADQLVCL GQHLERGDLA EGDVVAMAGI SIGMRWYCTL VRV