Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2142 |
Symbol | |
ID | 5707268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2464712 |
End bp | 2465392 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641271627 |
Product | hypothetical protein |
Protein accession | YP_001536998 |
Protein GI | 159037745 |
COG category | [R] General function prediction only |
COG ID | [COG3467] Predicted flavin-nucleotide-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.595619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0167174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGGCG CCGTCGGTCC ACCGTTGTCC GGCACGCCCC GCACCCGCCT GCGGCGTGGG CGCGAGAAGG CACGTGGCCG ACGGGAGGCA CTGCTCGACG TCCTCGCCGC CGGCTTCGTG TGTCACCTCG GGGTGGTCGT GGAGGGCGTC GTCATGGTGG TGCCCACCGT CTACGGCTAC GACCCCGACA CCCTCTACCT GCACGGGTCG GTGGCCAGCC GATCCCTCGC CGGTCCACCC GACGAGGTCT GCGTCACGGT CACGGTGCTG GACGGTGTGG TGCTCGCACG CTCGGTGTTC GAGCATTCCG TCAACTACCG CAGTGCGATG ATCTACGGCA GGCCGGGTGA CGTCACCGAC GACACCGAGA AGCTCGCCGC GCTGCGCCTG ATCACCGAGC ATGTCGCCCC GGGGCAGTGG GACTACGCCC GGCAACCCAA CCGGCGGGAG CTGGCGGCTA CCCGCCTGTG GGCCCTCTCC CTGGGCGAGG CGTCGGTCAA GGTCCGCAGC GGAGGGCCGG ACGACGCGGA CAGCGCCGAC GCCCGTGACG GCCGGTGGGC GGGTGAACTG CCGGTGCTCA CCGGGTTCGG CACGCCGGTG CCCGACCCGG CGCTGCCGGT CGGCACACCG GTGCCATGCC ACGTCGCGGA CCTGCCGGGC ACCTGGCCGG GGCGCGGCTG A
|
Protein sequence | MTGAVGPPLS GTPRTRLRRG REKARGRREA LLDVLAAGFV CHLGVVVEGV VMVVPTVYGY DPDTLYLHGS VASRSLAGPP DEVCVTVTVL DGVVLARSVF EHSVNYRSAM IYGRPGDVTD DTEKLAALRL ITEHVAPGQW DYARQPNRRE LAATRLWALS LGEASVKVRS GGPDDADSAD ARDGRWAGEL PVLTGFGTPV PDPALPVGTP VPCHVADLPG TWPGRG
|
| |