Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2131 |
Symbol | |
ID | 5704757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2452992 |
End bp | 2453492 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641271616 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001536987 |
Protein GI | 159037734 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.633257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.118205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGTGC CCGCATTCCC ACCGGACGGC TCCGGGTTCG ACGCGTTCGT ACGACAGAGC GCCGCCGGGC TCCTGCGCCT GGGTAACATC CTGACGCTGG ACCGAGCCGC CGCGGAGGAC CTCGCTCAGG AGACCCTCAT TCGCGTCGGG CTCGCCTGGC CGAGGCTGCG CGCGGACGGA AATCCGGTCG GCTATGCCCA GCGCACCATG ACCAACCTCT TTCTCAATCA GCGACGACGG CGCAGGCCGG TGCCGATCGG CACCATCCCG GAGATCGCGC GCGAGGACAC CGCACTGGCC GCGGTCGATT CAACAGCAAC CGTACGGCGG ATCCTCGCGA GTCTGCCGCC GAAGCAACGG GCGGTGATCG CACTGCGATA CGTGGCGGAC CTGTCAGACG ACGAGATCGG CCGCCTACTG GACTGTGCTC CCGCGACGGT GCGGTCGCAA CTCTCCCGTG GCCTGTCCCG CCTTCGTGCG ACTCTGACGA CAGAAGGGTG A
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Protein sequence | MKVPAFPPDG SGFDAFVRQS AAGLLRLGNI LTLDRAAAED LAQETLIRVG LAWPRLRADG NPVGYAQRTM TNLFLNQRRR RRPVPIGTIP EIAREDTALA AVDSTATVRR ILASLPPKQR AVIALRYVAD LSDDEIGRLL DCAPATVRSQ LSRGLSRLRA TLTTEG
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