Gene Sare_2131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2131 
Symbol 
ID5704757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2452992 
End bp2453492 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content68% 
IMG OID641271616 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001536987 
Protein GI159037734 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.633257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.118205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTGC CCGCATTCCC ACCGGACGGC TCCGGGTTCG ACGCGTTCGT ACGACAGAGC 
GCCGCCGGGC TCCTGCGCCT GGGTAACATC CTGACGCTGG ACCGAGCCGC CGCGGAGGAC
CTCGCTCAGG AGACCCTCAT TCGCGTCGGG CTCGCCTGGC CGAGGCTGCG CGCGGACGGA
AATCCGGTCG GCTATGCCCA GCGCACCATG ACCAACCTCT TTCTCAATCA GCGACGACGG
CGCAGGCCGG TGCCGATCGG CACCATCCCG GAGATCGCGC GCGAGGACAC CGCACTGGCC
GCGGTCGATT CAACAGCAAC CGTACGGCGG ATCCTCGCGA GTCTGCCGCC GAAGCAACGG
GCGGTGATCG CACTGCGATA CGTGGCGGAC CTGTCAGACG ACGAGATCGG CCGCCTACTG
GACTGTGCTC CCGCGACGGT GCGGTCGCAA CTCTCCCGTG GCCTGTCCCG CCTTCGTGCG
ACTCTGACGA CAGAAGGGTG A
 
Protein sequence
MKVPAFPPDG SGFDAFVRQS AAGLLRLGNI LTLDRAAAED LAQETLIRVG LAWPRLRADG 
NPVGYAQRTM TNLFLNQRRR RRPVPIGTIP EIAREDTALA AVDSTATVRR ILASLPPKQR
AVIALRYVAD LSDDEIGRLL DCAPATVRSQ LSRGLSRLRA TLTTEG