Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2110 |
Symbol | |
ID | 5704964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2430307 |
End bp | 2431017 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641271595 |
Product | DNA alkylation repair enzyme |
Protein accession | YP_001536966 |
Protein GI | 159037713 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4912] Predicted DNA alkylation repair enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.113394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0295427 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGATG TCAGCGCGGA GCAGTTCGTC GAGAAGCTGC GGACGTACCA GTCGGACGAA GAGCTCAGGA AGATCCAGCG CTACTTCAAG CACGCCGATG GCGACACCTT CATCGGCGTA CGGATGGGCC AGGTCTTCGC ACTGGCCAAG GAGTTCATCG ACATGGCGCC GGGCGAGATC GAAAAGCTGC TCGACAGCCC GGTGCACGAG GTCCGTGCCG GCGCGGTCAG CATCATGTCC AAACAGGCGT CGCGGAAGAA GACCACCGAC GCGCGCCGCG CGGAGCTGTA CGAGCTCTAC CTGCGCCGGC ACGACCGGAT CGACAACTGG GATCTGGTCG ACCTCGGTGC CGGGAACGTG GTGGGGGCGT ACCTGGTCGA CAAGCCCCGC GACGTGCTGT ACGAGTTGGT GCGTTCGGAC AACCCCTGGC AGCGGCGAAC CGCGATCGTC AGCACGATGG CGTTCCTACG GGCCGGCGAC GTGGACGACA CGTTCCGGAT CGCCGAGATC CTCGTAGCCG ATCCGCACGA TCTGGTGCAC AAGGCCACCG GCTGGCTGCT GCGCAGTGCC GGTGACCGGG ACCAGGCGCG GCTGCTCGCA TTCCTCGACC GGCACGCCGC CACCATGCCC CGGACGCTGT TGCGCTACGC CATCGAACAT CTCGACAAGG AGCAACGGAC CTACTACATG GGGCGCAAGA GGGCCGGGTA G
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Protein sequence | MTDVSAEQFV EKLRTYQSDE ELRKIQRYFK HADGDTFIGV RMGQVFALAK EFIDMAPGEI EKLLDSPVHE VRAGAVSIMS KQASRKKTTD ARRAELYELY LRRHDRIDNW DLVDLGAGNV VGAYLVDKPR DVLYELVRSD NPWQRRTAIV STMAFLRAGD VDDTFRIAEI LVADPHDLVH KATGWLLRSA GDRDQARLLA FLDRHAATMP RTLLRYAIEH LDKEQRTYYM GRKRAG
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