| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2089 |
|---|
| Symbol | |
|---|
| ID | 5704668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2403039 |
|---|
| End bp | 2404217 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641271574 |
|---|
| Product | acyl-CoA dehydrogenase type 2 |
|---|
| Protein accession | YP_001536945 |
|---|
| Protein GI | 159037692 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.878616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0250211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCACGA ATGTTCCCAC GCGTACGGAT CTACTCCGCA GTGCGGCCGA TCTCGCACCC
CTACTCCAGA AGTACGCCAC ATGGTCCGAA GAGAACCGGC GCCTGCACGA CGACGCGATT
CGAGGCCTGG CGTCCGCCGG TGTGTTCCGC CTGCGGACCC CGCGTCGGTA CGGTGGGTAC
GAATGCGACA GCCGCACCCT GGTCGACGTC GCGACCGAAC TGGCCCGGGG TGATGGGTCC
ACAGCCTGGA CCGCCTCGGT GTACTGGATT CCGACCTGGA TGGCGGCCCA GTTCCCCGAC
GAGGTTCAGG ACCAGGTGTT CGACACGGGT GACAGCCGGA TCTGCGGCAC GCTAAGCCCC
AGTGGCATGG CCACCCAGGT CGACGGCGGC GTCATCATCA ACGGCAAGTG GGGTTTCAGC
ACCGGTGCAC TACACGCCGA GTGGCAGCAG ATCATCGCTA TCCAGCAGAC GCCGGACAAC
CAGCCACTCC CCGTCGTGGC GCTGATACCC CTGTCCGACC TGCAGATTCT CGACGACTGG
TACACCTTCG GACTGAAGGG CACCGGCAGT GTGAGCACGG TGGCCCAGGA CGTGTTCGTA
CCCCAGGAGC GAGTTCTGCC CCTGCCCGCG ATCCTCGAGG GACAGGGCGC GTCACGGACG
AACGCCGAAG CGGCGATCTA CCGGGCCCCG CTGCTACCGG TCGCCTCCGC CTCCTCGGTC
GGCACCGCCC TCGGGTTGGC CAAGGCGGCA CGCCACGCAT TCATGGAACG ACTCCCCGAC
CGCAAGATCA CCTACACCGA GTACACCAGC CAGGCGACGG CCCCACTAAC CCATCGTCAG
GTGGCGGACG CGTTCATGAA GGTCGACCAG GCCGAGTTCC ACGCCTACCG GCTCGCCTCC
ACTCTCGATC AGAAAGCTGC GGCCCAGGAA CCGTGGACGC TGGAGGAGCG GGTTCGGTCC
CGAGCCGACC TGGGCGCCGT GTGCCAACTC GCGCGCGAAG CGGTGGACAT CCTGGCTGCC
GCCAGTGGCG GATCGTCGAT CTACCTGGAT GTGCCGATCC AGCGAATCCA GCGCGACATC
CAGGCGGTCA ACCTGCACGC GCTGATGCAT CCGAACACGA ACGCCGAGTT GTATGGTCGC
GTCCTTTGCG GCCTGGAGCC CAACACTTCC TATCTCTGA
|
|---|
| Protein sequence | MSTNVPTRTD LLRSAADLAP LLQKYATWSE ENRRLHDDAI RGLASAGVFR LRTPRRYGGY
ECDSRTLVDV ATELARGDGS TAWTASVYWI PTWMAAQFPD EVQDQVFDTG DSRICGTLSP
SGMATQVDGG VIINGKWGFS TGALHAEWQQ IIAIQQTPDN QPLPVVALIP LSDLQILDDW
YTFGLKGTGS VSTVAQDVFV PQERVLPLPA ILEGQGASRT NAEAAIYRAP LLPVASASSV
GTALGLAKAA RHAFMERLPD RKITYTEYTS QATAPLTHRQ VADAFMKVDQ AEFHAYRLAS
TLDQKAAAQE PWTLEERVRS RADLGAVCQL AREAVDILAA ASGGSSIYLD VPIQRIQRDI
QAVNLHALMH PNTNAELYGR VLCGLEPNTS YL
|
|---|
| |