Gene Sare_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2083 
Symbol 
ID5706803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2397979 
End bp2399226 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content69% 
IMG OID641271569 
Productarsenical pump membrane protein 
Protein accessionYP_001536940 
Protein GI159037687 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.964654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.119821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACAT TCGTGTCGGT TGTCATTCTG GTCGGTGTAC TGGGGTTTGC CCTTGTCCGG 
CCGTGGGGGT TGCCGGAGGC GGTGGGAGCC GTCCCAGGGG CCGGCCTGGT GGTGCTGCTT
GGCCTGGTGT CCTGGCAGGA TGCGGGACGG GAACTGGTCG TGTTGGGCCC AACCGTGGGA
TTCCTGGCGG CGGTGCTGAC ACTCGCCCAC CTGGCCGACG ACGCGGGCGT CTTCAGATAT
GCCGGTTGGG TGGCTGGGCG GGTGAGCCGC GGTTCACCGC GACGGTTGCT CGGTGTGCTA
TTCGTGATCG CGTCTGCGGT TACCGCTGTT TTGAGTCTGG ACGCGACGGT GGTGCTGTTG
ACGCCGGTGG TGTTGGCAAC CGCGATGAGG ATGCGGGTAC GCGCCAAACC CCACCTGTAC
GCGTGTACCC ATCTGGCGAA CTCCGCGTCT CTGCTGTTGC CGGTGTCGAA TCTGACGAAC
CTGTTGGCGT TCGCCGCGAG CGGATTGACC TTCGCCCGGT TCGCTGGGTT GATGGCGTTG
CCGTGGCTGG CCGTGGTGGC CACCGAGTAT CTGCTGTTTC GTTGGTTCTT CGCCGGTGAC
CTGGCCGCTC CCGCGCGTCG GGGTCCGCCC GCGACGCCGG TGCAGGCGCC GCGGTTCGCA
CTGGTGGTGT TGGCGGTCAC GTTGGTCGGG TTCGGGCTGG CCGAGCCGGT GGGCGTGCAT
CCGGCGTGGG TGGCCGCGGG CGGGGCGCTG GTACTAGCCA CCAACCGGCT GGTCCGGCGA
CCCTTGGCCG AGGTGGGACG GCTGGCGCGG GCCGCGAATC TGCCGTTCTG CGGGTTCGTG
TTCGGGTTGG GCATCGTGGT GCTGGCGGTG CGTTCCGGCG GGGTGGGCCT GGTGGTCGGC
CGGCTGATTC CCGCCTGGGG TGGGCTGGCG GGCCTGCTGG CCGTCGCGGT GCTGGCCGCG
GTGCTGGCGA ACCTGATGAA CAATCTGCCG GCCACGTTGA TGCTCACACC GCTGGTCGCG
CACTCGCCGG GGCTGGTTCT GGCGGCCCTA CTGGGGGTGA ACATCGGGCC CAATCTGACC
TATGTCGGCT CGCTGGCCAC CCTGTTGTGG CGGCAGATCC TGCACGCGAC CGCCCACCGG
CCTGCGGGGC GGGAGTTTCT ACGGCTGGGC GCGTTGACGG TGCCGGCGTG CCTGATGGCC
GGGGTGGCGG CGTTGTGGCT GGGGTTGCGA GTGTCGGGGA CGTCATGA
 
Protein sequence
MSTFVSVVIL VGVLGFALVR PWGLPEAVGA VPGAGLVVLL GLVSWQDAGR ELVVLGPTVG 
FLAAVLTLAH LADDAGVFRY AGWVAGRVSR GSPRRLLGVL FVIASAVTAV LSLDATVVLL
TPVVLATAMR MRVRAKPHLY ACTHLANSAS LLLPVSNLTN LLAFAASGLT FARFAGLMAL
PWLAVVATEY LLFRWFFAGD LAAPARRGPP ATPVQAPRFA LVVLAVTLVG FGLAEPVGVH
PAWVAAGGAL VLATNRLVRR PLAEVGRLAR AANLPFCGFV FGLGIVVLAV RSGGVGLVVG
RLIPAWGGLA GLLAVAVLAA VLANLMNNLP ATLMLTPLVA HSPGLVLAAL LGVNIGPNLT
YVGSLATLLW RQILHATAHR PAGREFLRLG ALTVPACLMA GVAALWLGLR VSGTS