| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2067 |
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| Symbol | |
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| ID | 5703278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 2366876 |
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| End bp | 2368582 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641271553 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001536924 |
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| Protein GI | 159037671 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.246741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGGCC AGGTACGCGT TGTGGATCGC ATCGCTGCGA CACTGGCCCG GTTGGGTGTC
CGCCACGTCT TCGGCGTCAG CGGCGCCAAC ATCGAGGACC TGTACGACGC GCTGCGCGGC
ACCGACGGTG CGACCTGCGG TGTAGTGGCC AAACACGAGT TCTCTGCGGC CACCATGGCA
GACGGCTCAG CCCGCGTCAC CGGTCGCTTC GGCGTGGTGT CGACGACCTC CGGCGGCGCC
GCGATGAATC TGGTGCCTGG GCTGGCGGAG GCGTATGCCT CGCGGGTGCC GATGTTGGCC
CTGGTCGGCC AGCCACCCAC GGCCCAGGAG GGACGTGGGG CGTTCCAGGA AACCAGCGGT
CTGGCGGGCT CGTTCGACGC GATGGCGGTA CTCGACCCTG TCTCCCGGTT CTGTGCCCGG
GTGGAGGATC CGGCTCGTAT CGACGCTGCC CTCACCGCAG CGATCTCCGC GGCACACCAG
GACCCGAAGG GGCCGGCGGT GCTGCTGCTA CCCAAGGATG TGCAGCAGGC ACTGGTCGAC
GACTCCCCGA GTCGTGTCCT CACCGTCGCG GCGCCGGCCA GCCCGGCACC GACGCCGGCC
CTGGACCAGG CGGCAGCTCT GCTCCGCGAG GCACGGCAGG CTCTGGTCAT CGCCGGTGCG
GGTGTGGCCT CGTCGGGTGG CCGACGGGAA CTGGATCGTC TGGTGGGGCG CCTCGGCGCA
TGGGTGGCGG CCACCCCAGA CGCCAGGGAT GCCTTCGACA ACCGTCATCC GGCATTCGCT
GGTGTCGCCG GGGTGATGGG ACACGACGCC GTCGGCGAGC TACTGCAACG AGCCGACCTG
TGCCTGCTGG CGGGCACCCG GCTGCCCGCC CTGGCGCGCA ACGGACTGGA AGAGGCGCTG
GCGGGGATGC CGGTGATCTG CGTCGACCCC GAGCCACCGC ACATCCCGGG CCTCGCACTG
ATGGGTTGCC CGCAAGCCAC ACTGCGCGCC TTGTCGCTGC GTTTGGGCGC TCACCGACGG
TCATGTCCGC CTCACCCTGG GCCTGTCCTG CTCTCGGGCG GTACGTCGTC CGGGGAGACG
CTGCGGGCAT ACGCCGATGC CCTCCACGTG ATCTCCACCG TCCTGGCGCC CGACGTTCAC
GTCTTCGTCG ATGCCGGCAA TGCGGCTGCG GCCGCGATCC ATGCGCTGTC GCCTGCCCCT
CGAGGACGTT TCGTCGTGGC GCTGGGAATG GGTGGTATGG GCTACACCTT CGGAGCGGGG
ATCGGCGCGG CGCTGGCCAC TGGACGGCGT ACGTACGTCC TGGCAGGAGA TGGTGCGTTC
TATGCACACG GCACCGAGGT GCACACCGCA CTGGAAGCCG CCGCCCCCGT CACCTTCGTG
ATCTTCAACA ACAACGCGCA CGCCATGTGC GTCACCCGCG AGGACCTGTT CCAAGGCGGC
GCCAGCGGCG TCAACGCCTT CCGGCCGTCG GACATCGCCG CCGGTGTATC CGCGATGTTT
CCGGGTCTTC GGGCAACCCG CGCCAGCACC GCGCCCCAGT TGCGTGCGGC CCTGCTGGCG
GGTCAGGCCG GTGGCGGTCC GGCTCTCGTG GCCATGGACT TCGATCCCGC TGAACTACCG
CCGTTTCGTC CGTTCCTGGC CGCGGGCCAG GCACCCGTCA ACAACCAGGA GGGTGATCAT
GACGACCGCG CCGTCCACGT TGGCTGA
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| Protein sequence | MTGQVRVVDR IAATLARLGV RHVFGVSGAN IEDLYDALRG TDGATCGVVA KHEFSAATMA
DGSARVTGRF GVVSTTSGGA AMNLVPGLAE AYASRVPMLA LVGQPPTAQE GRGAFQETSG
LAGSFDAMAV LDPVSRFCAR VEDPARIDAA LTAAISAAHQ DPKGPAVLLL PKDVQQALVD
DSPSRVLTVA APASPAPTPA LDQAAALLRE ARQALVIAGA GVASSGGRRE LDRLVGRLGA
WVAATPDARD AFDNRHPAFA GVAGVMGHDA VGELLQRADL CLLAGTRLPA LARNGLEEAL
AGMPVICVDP EPPHIPGLAL MGCPQATLRA LSLRLGAHRR SCPPHPGPVL LSGGTSSGET
LRAYADALHV ISTVLAPDVH VFVDAGNAAA AAIHALSPAP RGRFVVALGM GGMGYTFGAG
IGAALATGRR TYVLAGDGAF YAHGTEVHTA LEAAAPVTFV IFNNNAHAMC VTREDLFQGG
ASGVNAFRPS DIAAGVSAMF PGLRATRAST APQLRAALLA GQAGGGPALV AMDFDPAELP
PFRPFLAAGQ APVNNQEGDH DDRAVHVG
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