Gene Sare_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2060 
Symbol 
ID5704732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2358829 
End bp2359557 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID641271547 
ProductNUDIX hydrolase 
Protein accessionYP_001536918 
Protein GI159037665 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00217301 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGACG ATCGTTGGGT TCCGCCGACC GTTCTTCTTG CGGTTGACCT CGTCATCCTC 
ACCTTGCGGG AGTCCTGCCT TCATGTGCTG TTGATCGAGC GTGGGGTTGA GCCCTATCAG
GGCGCCTTGG CCCTGCCTGG CGGCTTCCTC GGCCACGAGA AGGAAGACCT CGTGACGGCT
GCCCATCGAG AGCTTGCCGA GGAGGCGGGT TTGGGGCCGG ATCAGTTGCA CCTGGAACAA
CTTGGCGTCT ACGGTGCGCC GGATCGTGAC CCCCGAGGGC GGGTGGTCTC CGCGGCTTAC
CTGGCCATTG CCCCTCGGCT ACCCGAGCCG GTTGCCGGCA CCGACGCATC TCGGGCGTGT
TGGATCCCGG TGGCGCAGGC GTGGTCCGGT GACGTACAGC TCGCCTTCGA TCATGAGCAG
ATCCTGACCG ATGGGGTCGA CCGTGCGCGG GAGAAGTTGG AGCGCTCGGC GCTTGCCACC
GCCTTTTGTG GTCCGACCTT CACGATCTCG GAGCTTCAGG ACGTCTACGA GGCGGTGTGG
GGCGTGCCGC TCGATGCGCG GAACTTCTAC CGGAAAGTGC AGAGCGTGGA CGGCTTCATC
GTCCCCGCCG GGCCGAGTCG CAGGACCGAT GGTGGGCGTC CCGCTCGGCT ATTCCGTCCC
GGGCCCCGCA CGACTCTTCA CCCTCCGATG ATCCAACCCC TCAGCCAGGC AGAGAGGGAG
ACAGCGTGA
 
Protein sequence
MSDDRWVPPT VLLAVDLVIL TLRESCLHVL LIERGVEPYQ GALALPGGFL GHEKEDLVTA 
AHRELAEEAG LGPDQLHLEQ LGVYGAPDRD PRGRVVSAAY LAIAPRLPEP VAGTDASRAC
WIPVAQAWSG DVQLAFDHEQ ILTDGVDRAR EKLERSALAT AFCGPTFTIS ELQDVYEAVW
GVPLDARNFY RKVQSVDGFI VPAGPSRRTD GGRPARLFRP GPRTTLHPPM IQPLSQAERE
TA