Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2060 |
Symbol | |
ID | 5704732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2358829 |
End bp | 2359557 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641271547 |
Product | NUDIX hydrolase |
Protein accession | YP_001536918 |
Protein GI | 159037665 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00217301 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGACG ATCGTTGGGT TCCGCCGACC GTTCTTCTTG CGGTTGACCT CGTCATCCTC ACCTTGCGGG AGTCCTGCCT TCATGTGCTG TTGATCGAGC GTGGGGTTGA GCCCTATCAG GGCGCCTTGG CCCTGCCTGG CGGCTTCCTC GGCCACGAGA AGGAAGACCT CGTGACGGCT GCCCATCGAG AGCTTGCCGA GGAGGCGGGT TTGGGGCCGG ATCAGTTGCA CCTGGAACAA CTTGGCGTCT ACGGTGCGCC GGATCGTGAC CCCCGAGGGC GGGTGGTCTC CGCGGCTTAC CTGGCCATTG CCCCTCGGCT ACCCGAGCCG GTTGCCGGCA CCGACGCATC TCGGGCGTGT TGGATCCCGG TGGCGCAGGC GTGGTCCGGT GACGTACAGC TCGCCTTCGA TCATGAGCAG ATCCTGACCG ATGGGGTCGA CCGTGCGCGG GAGAAGTTGG AGCGCTCGGC GCTTGCCACC GCCTTTTGTG GTCCGACCTT CACGATCTCG GAGCTTCAGG ACGTCTACGA GGCGGTGTGG GGCGTGCCGC TCGATGCGCG GAACTTCTAC CGGAAAGTGC AGAGCGTGGA CGGCTTCATC GTCCCCGCCG GGCCGAGTCG CAGGACCGAT GGTGGGCGTC CCGCTCGGCT ATTCCGTCCC GGGCCCCGCA CGACTCTTCA CCCTCCGATG ATCCAACCCC TCAGCCAGGC AGAGAGGGAG ACAGCGTGA
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Protein sequence | MSDDRWVPPT VLLAVDLVIL TLRESCLHVL LIERGVEPYQ GALALPGGFL GHEKEDLVTA AHRELAEEAG LGPDQLHLEQ LGVYGAPDRD PRGRVVSAAY LAIAPRLPEP VAGTDASRAC WIPVAQAWSG DVQLAFDHEQ ILTDGVDRAR EKLERSALAT AFCGPTFTIS ELQDVYEAVW GVPLDARNFY RKVQSVDGFI VPAGPSRRTD GGRPARLFRP GPRTTLHPPM IQPLSQAERE TA
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