| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2034 |
|---|
| Symbol | |
|---|
| ID | 5705688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2328286 |
|---|
| End bp | 2329416 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641271524 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_001536895 |
|---|
| Protein GI | 159037642 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.1422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0082448 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGT TGTCCAAGAT CGCCATGTCG CCGGACGTCG ACCGCCGCAT CTCCGCCGTG
TTGCACAGCG GACGCCTGGA GCACGGGCCG ACCGTGGCCG AGTACGAGGC GACGGTCGGC
GAACGCGTCG GCAATCCCCG CGTCGTGTCG GTCAACTGCG GCACCGCCGG ACTGCACCTG
GCCCTCAGCC TCGCCGCCCG CCCCGGCCCC GGGCAAGCCG ATCGGGCCGA ACCGGGTGAG
GTGCTGAGTA CCCCGCTGAC CTTCGAGGGC ACCAACTGGC CAGCCCTCGC CAATGGGCTG
CGGGTGCGCT GGGTCGATGT CGACCCGGCG ACGCTCAACG TCGACCTCGA CGATCTGGCG
GCCAAGATCT CACCGGCCAC CCGGGCCATC GTGGTCGTGC ACTGGCTCGG ATACCCCGTG
GACCTCAACC GGCTCTGCGC CGTGGTGGAC CAGGCCGCAG CCAGGTACGG ACACCGGCCT
TTGATCATCG AGGACTGCGC TCAGGCGTGG GGCGCCACCT ACCGGGGCAC CCCGCTCGGC
ACGCACGGCA ACGTCTGCGT GTTCAGCACC GGCGCGATCA AGACGCTCAC CACCGGCAGT
GGCGGACTGG TCGTGCTGCC CGACGACGAC CTGCACGAGC GGCTGCGGCT CCGCCGGTGG
CTGGGCATCG AGCGAGCCTC GGCCCGGATC ACCGGCGACT ACGACGTGGC CGAATGGGGA
TACCGGTTCG TCCTCAACGA GATCGGTGGC GCGATCGGGC TGTCCAACCT GGAACACGTC
GACGAACTAC TGCGCCGGCA CCGGGAGAAC GCCGCCTACT ACGACAAGGA GTTGACCGGT
CTCGACGGCG TCGAACACAC CGAACGCGCC GACGACCGGG AACCCTCGTT CTGGGTGTAC
CCCCTGAAGG TACGCGACCG TTCCGCCTTC ATGTGCCGAC TGCGCGACGC CGGCATCGCC
AGCAGTGTCA TCTCCCGCCG CAACGACGCG CACAGCTGCA TGGCGTCATC ACGAGCCCAC
CTACCCGGCC TGGACTCGGT GGCCGACCGG GTGGTCTACA TCCCGGTGGG CTGGTGGCTC
ACCGCGGAGG ACCGTTCCCA CGTCGTCGAA ACGATCAGAT CCGGCTGGTG A
|
|---|
| Protein sequence | MIPLSKIAMS PDVDRRISAV LHSGRLEHGP TVAEYEATVG ERVGNPRVVS VNCGTAGLHL
ALSLAARPGP GQADRAEPGE VLSTPLTFEG TNWPALANGL RVRWVDVDPA TLNVDLDDLA
AKISPATRAI VVVHWLGYPV DLNRLCAVVD QAAARYGHRP LIIEDCAQAW GATYRGTPLG
THGNVCVFST GAIKTLTTGS GGLVVLPDDD LHERLRLRRW LGIERASARI TGDYDVAEWG
YRFVLNEIGG AIGLSNLEHV DELLRRHREN AAYYDKELTG LDGVEHTERA DDREPSFWVY
PLKVRDRSAF MCRLRDAGIA SSVISRRNDA HSCMASSRAH LPGLDSVADR VVYIPVGWWL
TAEDRSHVVE TIRSGW
|
|---|
| |