| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2018 |
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| Symbol | |
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| ID | 5704455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 2310662 |
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| End bp | 2311225 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641271510 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001536881 |
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| Protein GI | 159037628 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00148325 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAGTAC GCGCCCTGGC GGTTCCGGGT AGTTTCGAAT TCACCCCTCA GACGCACGAC
GACCATCGCG GGGTCTTCGT CTCACCCATG CAGCAGACCC CGTTCGTCGA GGCCGTCGGC
CACCGGTTCG AGGTGGCGCA AACCAACCAC AGCCGCTCCG CGCGAGGCGT GCTACGGGGA
GTGCACTTCA CCGCCACACC GCCCGGGCAG GCCAAGTACG TCCACTGTCC GCACGGCCGC
GTCCTCGACG TGGTGGTGGA CCTACGGGTC GGATCCCCGG CCTTCGGCAC CTGGGACGCC
GTCGAGCTGG ACCCGATCTC GTTCCGCGCG GTCTATCTGC CGGTAGGGGT AGGTCACACG
TTCCTCGCAC TGGAGGACGA CTCGATCGTG TCCTACCTGG CTTCCACCGA GTACGCAGCT
GAGCGGGAGT TGGGTGTGAA CCCGCTCGAC CCGCAACTGG CCCTGCCGTG GCCGAAGGGG
ACGGAGTTCT GCCTCTCCGA GCGGGACCGC ACCGCGGTCA GCCTCGAGGA GGCGATGAGG
TCGGGGATCC TTCCGCGTCA CTGA
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| Protein sequence | MKVRALAVPG SFEFTPQTHD DHRGVFVSPM QQTPFVEAVG HRFEVAQTNH SRSARGVLRG
VHFTATPPGQ AKYVHCPHGR VLDVVVDLRV GSPAFGTWDA VELDPISFRA VYLPVGVGHT
FLALEDDSIV SYLASTEYAA ERELGVNPLD PQLALPWPKG TEFCLSERDR TAVSLEEAMR
SGILPRH
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