Gene Sare_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2002 
Symbol 
ID5704367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2300210 
End bp2300674 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content70% 
IMG OID641271498 
Producthypothetical protein 
Protein accessionYP_001536869 
Protein GI159037616 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.711361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000340708 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGTCGTGT GCCTTCCGAT GTTCGGCATG ACGCGCGCCG CCACGGCTGC GGCCTTCGCT 
CCCGCATTCG CGGGCGCGGG ACTGCGGGAG GTGTACCCGG ATCTGCCCGG CCACGGCGAC
TCTCCAGCTG GCTGCCCAGC CGCATCCCAG GCAGTCCTGG ACGCCGTGTG CGCGTGGCTC
GACCGCCACG TCGGCGCGCC GGTCCTGCTG GCTGGTGCGT CCTACGGCGC CTACCTCGCC
GCCGGGATCG CGCGCCAGCG GCCGGAGATC GTCCGCGGCC TGCTCCTCGT CTGCCCAGGG
GTCACGATGT CGCGAGGAAG TCGAAACCTG CCTGAGATCT CCACAGCTCA GATCGACGCG
CCCGAGTCGC GGAGAGGGAA GGCATCCCGC TCGACGTGCT GCGGCATCGT AGGGGTCGGT
CCGTTGCGTT ACCGGCTGAT CGAGATGACT AGCATCCGTT CATGA
 
Protein sequence
MVVCLPMFGM TRAATAAAFA PAFAGAGLRE VYPDLPGHGD SPAGCPAASQ AVLDAVCAWL 
DRHVGAPVLL AGASYGAYLA AGIARQRPEI VRGLLLVCPG VTMSRGSRNL PEISTAQIDA
PESRRGKASR STCCGIVGVG PLRYRLIEMT SIRS