Gene Sare_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1998 
Symbol 
ID5704363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2296673 
End bp2297452 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content71% 
IMG OID641271495 
Producttransposase IS4 family protein 
Protein accessionYP_001536866 
Protein GI159037613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0111459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGACCT ATCCTGCCAG CATCCCGCTG TCCACGCGCA GCCTGACCCT CATGACCACG 
CTGATCCGCG ACCACCGCCG CGCGCTCGGC ACCCGATGGC GGAGGCTGCC CGCGCAGCAG
CAGGCACTGA TGGCCCTGGC CCACCTACGC AACGGCGACA CCCTCACCCG CCTCGCCGCC
GGCTTCAAGG TGTCCGTGGC CACCGTCTGG CGCTACCTAC GCGAGGCCGT CGACCTGCTC
GCCGCCTGCG CCGACGACCT CGCCGCCGTC ATGCGCCGAG CCGCACGGCT CGCCTACGCC
ATCCTCGACG GCACGCTGAT CCCGATCGAC CGGGTCGCCG ACCAACGCCC CTACTACTCG
GGCAAGCACA AGCGCCACGG GGTAAACGTG CAGGTCCTGG CCGATGCCGC CGGGCGGCTG
GTCTGGGCGC CGGCCGCACT GCCCGGCGCG GTCCACGATC TCACCGCCGC CCGCACCGGC
TTGATCGACG CGCAGACCAG AGCAAACGTG CTGACCTTCG CGGACAAGGG TTATCAGGGA
GCCGGCGGGA ACGTGCGCAC GCCGTTCAAG CGCCACCGAT ACCGACCGAA ACTGTCCCAC
CGCCAGCGGG CCGTCAACCG TGGTCATGCC CGGCTCCGCG CTCGCGGCGA GCGAGCCATC
GCCACGCTGA AGACCTGGAA GGTCCTCACC AGGCTGCGTT GCTGTCCCCG CCGCGCGACA
GCGATCGTTC AGGCCATCCT CGTCCTGCAC GCCGTCGAGA CGAGCCGCTA CTCAGGATGA
 
Protein sequence
MLTYPASIPL STRSLTLMTT LIRDHRRALG TRWRRLPAQQ QALMALAHLR NGDTLTRLAA 
GFKVSVATVW RYLREAVDLL AACADDLAAV MRRAARLAYA ILDGTLIPID RVADQRPYYS
GKHKRHGVNV QVLADAAGRL VWAPAALPGA VHDLTAARTG LIDAQTRANV LTFADKGYQG
AGGNVRTPFK RHRYRPKLSH RQRAVNRGHA RLRARGERAI ATLKTWKVLT RLRCCPRRAT
AIVQAILVLH AVETSRYSG