Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1998 |
Symbol | |
ID | 5704363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2296673 |
End bp | 2297452 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641271495 |
Product | transposase IS4 family protein |
Protein accession | YP_001536866 |
Protein GI | 159037613 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0111459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTGACCT ATCCTGCCAG CATCCCGCTG TCCACGCGCA GCCTGACCCT CATGACCACG CTGATCCGCG ACCACCGCCG CGCGCTCGGC ACCCGATGGC GGAGGCTGCC CGCGCAGCAG CAGGCACTGA TGGCCCTGGC CCACCTACGC AACGGCGACA CCCTCACCCG CCTCGCCGCC GGCTTCAAGG TGTCCGTGGC CACCGTCTGG CGCTACCTAC GCGAGGCCGT CGACCTGCTC GCCGCCTGCG CCGACGACCT CGCCGCCGTC ATGCGCCGAG CCGCACGGCT CGCCTACGCC ATCCTCGACG GCACGCTGAT CCCGATCGAC CGGGTCGCCG ACCAACGCCC CTACTACTCG GGCAAGCACA AGCGCCACGG GGTAAACGTG CAGGTCCTGG CCGATGCCGC CGGGCGGCTG GTCTGGGCGC CGGCCGCACT GCCCGGCGCG GTCCACGATC TCACCGCCGC CCGCACCGGC TTGATCGACG CGCAGACCAG AGCAAACGTG CTGACCTTCG CGGACAAGGG TTATCAGGGA GCCGGCGGGA ACGTGCGCAC GCCGTTCAAG CGCCACCGAT ACCGACCGAA ACTGTCCCAC CGCCAGCGGG CCGTCAACCG TGGTCATGCC CGGCTCCGCG CTCGCGGCGA GCGAGCCATC GCCACGCTGA AGACCTGGAA GGTCCTCACC AGGCTGCGTT GCTGTCCCCG CCGCGCGACA GCGATCGTTC AGGCCATCCT CGTCCTGCAC GCCGTCGAGA CGAGCCGCTA CTCAGGATGA
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Protein sequence | MLTYPASIPL STRSLTLMTT LIRDHRRALG TRWRRLPAQQ QALMALAHLR NGDTLTRLAA GFKVSVATVW RYLREAVDLL AACADDLAAV MRRAARLAYA ILDGTLIPID RVADQRPYYS GKHKRHGVNV QVLADAAGRL VWAPAALPGA VHDLTAARTG LIDAQTRANV LTFADKGYQG AGGNVRTPFK RHRYRPKLSH RQRAVNRGHA RLRARGERAI ATLKTWKVLT RLRCCPRRAT AIVQAILVLH AVETSRYSG
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