Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1965 |
Symbol | |
ID | 5705212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2260733 |
End bp | 2261413 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641271470 |
Product | hypothetical protein |
Protein accession | YP_001536841 |
Protein GI | 159037588 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.189477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGCAC TGACCAAACC GCTACCGTTG CGCGACGAGG TGTTCCTGCT TGGCCACGAC GGCGACACCG GCCGCACCCA CATCTACCGG CAAGCCCTCG CCCTCGGCCT AGCCGGCGCT GTCCTCATCG ACCTGTTCCT GGCCGGGCGA ATCGCGCTAC GCCCAACCCA CCCCGCCGGT GCCCCGTACC TATACCTGCA CCGACACTAC GAGCGGCCCA CCGGCGACCT GATCGCCGAC ACCGCGATTA CCTCAATCCG CCACGCGAAC ACCCCGCCAC CGCTACGCGG CTTTCTACGC GGATTCAGCA TCGACCTCTA CGAACGCACC CGCGCCGCCC TGGTCACCGC CGGCATCCTG CACCACCACC AACGACGCCG CATGGCCGGA CTCATGCGCA CCGACACCTA CCTACCCAGC CACCACCGTT GGCAGATCGT CCCCCGCGCC CGACTATGCG CCCTCGCCAG AGGACGAGAA CAACCCGACA ACCACACCGC CGCCCTCGCC GGCCTCGTCG CTGTACTCGG CCTCACCAAC CACCTGTACC TCGACGACGA CACCGCCACC CTACCCGGCC GACTACTAAA CGTAGCCAAC CAGCACCACC AACCCGTACG AGCCATCACC ACCGCCGTGG ACACCACCAT CGGCGACCTC GCCACCGCCG CCTACCGATA G
|
Protein sequence | MTALTKPLPL RDEVFLLGHD GDTGRTHIYR QALALGLAGA VLIDLFLAGR IALRPTHPAG APYLYLHRHY ERPTGDLIAD TAITSIRHAN TPPPLRGFLR GFSIDLYERT RAALVTAGIL HHHQRRRMAG LMRTDTYLPS HHRWQIVPRA RLCALARGRE QPDNHTAALA GLVAVLGLTN HLYLDDDTAT LPGRLLNVAN QHHQPVRAIT TAVDTTIGDL ATAAYR
|
| |