| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1931 |
|---|
| Symbol | |
|---|
| ID | 5704778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2227400 |
|---|
| End bp | 2228407 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641271436 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001536807 |
|---|
| Protein GI | 159037554 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.464515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00506626 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA TGGAGTTCAC CCGACACGGC GCCCTGTTGG TGCCGGCCGG AACGCTACCC
GCCGAGGCGG GCGAGATTGA CCGCCCGGCC GCACCGGACC CGGTTTCCGC ACCGGTCGCC
GCGCCGCAGG TGCCGGCACG GCCAAGCCGG GTCGAGCGGC GCCGGGCACG CCGTGACGCC
GACGCGCGGG CCGCCCGGGC GGCGGTGCTG GCCGGGGAGA CGAAGAAGGT TCAGCGTTGG
ACCGCTCGCG CGGCTGAGGC CCGGCACCTG CGGCGGCTGC TGCTCGACCC GGATGTGCAA
GCGGTGCGGC TGATGCGCCA GCGGGCACGC TGGTCGGCCA TGGCGTGGTC AGCGCTGGTG
TTCGCGCTGC TGTTCACGAT GGTCAACGTC CAACGGTTCG CCGCCGGCCA CGCCGACCCG
TGGTCCCCGA TGTGGATCGT GGCGTGGCTG GTCGATCCGG CGTTCTCGAT CCTGCTGGTC
GGTCTGCTCA TCGCCCGAGG ACACCTGTCG GCCGTCCGGC GACGGGTCAC CGAACCCATC
GTCAAGCACG TCGAGTACGG CCTACTGGCC GCCACAGCAG CGATGAACGT GGCCCCAGAG
TTGACCCAAC GCTTCCCCGG CGGAATCGCC GAACAGGTCG CCTCGGTCGT GCTGCACCTG
CTGGTGCCGC TGCTGGCGTT CGCCGCCGCG AGCGTGATCA CGCTGATTCA AGACCACTTC
GCCGCCGCAA TCGCCGCCCT CACCAACCCG CCCGACGGTG GCCTTCCGAC CGGCATCAAC
CTGCACGAAC ACCCCGATAC CACCGCCGCG ATGGTCGAGC TTTCCGCCGA CGACCGGAAA
CTTCTGAACG CCGTCCGGCA CGCCATCACC AGCGGGGATC TCAACACCGA CCCGAACGGC
TACGCCATCT ACCGCCGCGT GATGGGCGGC CGAGGTGACA AGACCCGCGC CTACCGCATC
GCCACCGCCG TCAACGGCTG GCGACCCGAC CTGCACGCCG TCGCCTAA
|
|---|
| Protein sequence | MTAMEFTRHG ALLVPAGTLP AEAGEIDRPA APDPVSAPVA APQVPARPSR VERRRARRDA
DARAARAAVL AGETKKVQRW TARAAEARHL RRLLLDPDVQ AVRLMRQRAR WSAMAWSALV
FALLFTMVNV QRFAAGHADP WSPMWIVAWL VDPAFSILLV GLLIARGHLS AVRRRVTEPI
VKHVEYGLLA ATAAMNVAPE LTQRFPGGIA EQVASVVLHL LVPLLAFAAA SVITLIQDHF
AAAIAALTNP PDGGLPTGIN LHEHPDTTAA MVELSADDRK LLNAVRHAIT SGDLNTDPNG
YAIYRRVMGG RGDKTRAYRI ATAVNGWRPD LHAVA
|
|---|
| |