Gene Sare_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1920 
Symbol 
ID5708272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand+ 
Start bp2216046 
End bp2216726 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID641271424 
Productcytidylate kinase 
Protein accessionYP_001536796 
Protein GI159037543 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.0011282 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAGGAAA ACGTACGGAC CGGGCGCTGC GTGGTCGCTG TGGACGGGCC GTCCGGTTCG 
GGTAAGTCCA CCGTCTCCCG ACGACTCGCG ATCGACCTGG GCGCCCGCTA CCTCGACACC 
GGCGCGATGT ACCGGGCAAT CACCTGGGCG GTGCTGCGCT CCGGAGTCGA CCTGACAGAC 
CCGTCGGCCG TGGCCAAGGT CGCCGGAGAA ACCGACCTGC GCATCGGTAC CGACCCCGAG 
GGACACAGCG TGACCGTCGA CGGAGTACAC GTCGAGGCGG AGATCCGCGG ACCCGAGGTG 
ACCGGGGCAG TCTCGGCCGT GGCCGCCGTA CCGGCGGTCC GCTCGTTGCT CGTGACCCGG 
CAACGGGACC TGGCCGCCGC CGGTCGAATC GTGATCGAGG GGCGTGACAT CGGCGCGGTG 
GTGGCGCCCC ACGCCGACCT GAAGGTCCAC CTGACCGCAT CGCCGGCGAC CCGGGCGGCC 
CGGCGCAGCG CCGAGGACGC TACCGACGTC GGCGCCACCG CCGCGGACCT GGCCCGTCGG 
GATCGGCTGG ACTCGACGCG TAAGGCCGAC CCGTTGGTCC AGGCCCCGGA CGCCGTGGTG 
CTGGACACAA CCGAAATCGG CATCGACCAG GTCGTCGCGC GCCTGCGGGA ACTGCTGGCC 
GAGCGGGGCG TAAGCCGATG A
 
Protein sequence
MEENVRTGRC VVAVDGPSGS GKSTVSRRLA IDLGARYLDT GAMYRAITWA VLRSGVDLTD 
PSAVAKVAGE TDLRIGTDPE GHSVTVDGVH VEAEIRGPEV TGAVSAVAAV PAVRSLLVTR 
QRDLAAAGRI VIEGRDIGAV VAPHADLKVH LTASPATRAA RRSAEDATDV GATAADLARR 
DRLDSTRKAD PLVQAPDAVV LDTTEIGIDQ VVARLRELLA ERGVSR