| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1900 |
|---|
| Symbol | |
|---|
| ID | 5705945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2193814 |
|---|
| End bp | 2194458 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641271404 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001536776 |
|---|
| Protein GI | 159037523 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3937] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.268578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000215916 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACG CGTGGCGCTC CTACCTTGCG TTGGCCATGG GCCTGACGGA GGCGCCCCGG
AAGAAGGCCC AGGAGACGGC CCGGCGGCTG GTCGGTGCTG GCGGCGCGAC GGCTGTCCAG
TTTCAGACGC TCGCCGAGGA AATCGTGTCC ACCGGTGCGG CCAACCGGGG GGCGCTGACC
AAGCTGGTCC GGTTCGAGGT CGAACGGGCG CTCGGGGCTG TCGGCCTCGC CACCGCCGAC
GAGGTGAGTG ATCTGACCCG GCGGGTGTAC GAGCTGGAGC GACAGCTACG GGAGGTACGG
ACCGGTGGGC CGGCGGCCCT CGGTGCCGGC GGTGCCGAGA CGGGTACGGA CACGGGTCCA
GTGCTCGCGT CGGGCACCGC CGCGGGGCCC ACGGTGCAGC CGACGACTAC CGTGCCCGCC
GCAACCGGGA AGGCTCCGTC CGTGGGCGCC ACGAGCCCAC CAACTCCGGC AAAGAAGACA
GTCGCGAAGA AAGCGGTCGC GAAGAAGGCA GTCGCGAAGA AGGCAGTCGC GAAGAAGCCC
GTGGCGAGGA AGTCGGTGGC GGTCCGGCCG TCGACCGAGA TGTCGCCCGC ACCACGGCCG
GCGAAGCGGA CGCCACGCAA GCAGCAGCCG GGTGGACCGG CGTGA
|
|---|
| Protein sequence | MQDAWRSYLA LAMGLTEAPR KKAQETARRL VGAGGATAVQ FQTLAEEIVS TGAANRGALT
KLVRFEVERA LGAVGLATAD EVSDLTRRVY ELERQLREVR TGGPAALGAG GAETGTDTGP
VLASGTAAGP TVQPTTTVPA ATGKAPSVGA TSPPTPAKKT VAKKAVAKKA VAKKAVAKKP
VARKSVAVRP STEMSPAPRP AKRTPRKQQP GGPA
|
|---|
| |