| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1871 |
|---|
| Symbol | ribH |
|---|
| ID | 5704829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2158073 |
|---|
| End bp | 2158570 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641271372 |
|---|
| Product | 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| Protein accession | YP_001536747 |
|---|
| Protein GI | 159037494 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0054] Riboflavin synthase beta-chain |
|---|
| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.710697 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGGT TCGGGGAGCC GGGCATCGAT ACGGTCGACG CCGCCGGCCT GACCGTCGGT
GTGGTCGCCG CCCGCTGGCA CGGCGAGTTG ACCGATCACA TGCTGGAGCG GGCGGTCGCC
GCCGCCGACG CCTGCGGAGC CCGTTCCGTG GTGGCCCGGG TGGCCGGCTC GGTGGAGCTG
CCCGTGGTGG CGCAGGCACT CGCCCGCCGC TACGACGTCG TGGTGGCGCT CGGGGTTGTG
GTCCGCGGGG CCACCGCCCA CTTCGACTAC GTCTGCCGGT CGGTGACCGA CGGGCTCACC
CGGGTCGCCC TGGACGAGGG GAAACCGGTC GGGCACGGTG TGCTGACGGT CAACACGATC
GAGCAGGCCC GAGACCGGGC TGGGCTGCCT GGTTCGGCGG AGGACAAGGG CTGGGCGACC
ACCGTCGCCG TCCTGGACGC GGCGCTTGCG GTTCGTGGTC TGGCCCGCAC CACCCAACGG
GTGGGCTTCG ACGCCTGA
|
|---|
| Protein sequence | MAGFGEPGID TVDAAGLTVG VVAARWHGEL TDHMLERAVA AADACGARSV VARVAGSVEL
PVVAQALARR YDVVVALGVV VRGATAHFDY VCRSVTDGLT RVALDEGKPV GHGVLTVNTI
EQARDRAGLP GSAEDKGWAT TVAVLDAALA VRGLARTTQR VGFDA
|
|---|
| |