| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1867 |
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| Symbol | |
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| ID | 5704825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 2154382 |
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| End bp | 2155443 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641271368 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001536743 |
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| Protein GI | 159037490 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTG TCTCCGTCGA CGAGGCAATG CGCCGTGCGG TCGAGCTCGC CGCGCGCGGC
CTCGGCACCA CCAGCCCCAA CCCGGTCGTC GGCTGCGTGC TGCTCGACCC GGGCGGCCGG
GTCGTCGGTG AGGGCTTCCA CGCGTACGCG GGCGGGCCGC ACGCCGAGAT CGTCGCGCTC
GCCCAAGCGG GAGAACGGGC GCGCGGCGGC ACCGCGGTGG TAACTCTGGA ACCCTGCGAC
CACACCGGCC GCACCGGCCC CTGCAGCACC GCTCTGGTAC AGGCCGGGAT CGCCCGGGTG
GTCATCGCCG TACCCGACCC GAACCGGGCC GCCTCGGGCG GCGCTGCCAC GCTGCGTGCC
GCCGGGATCC GGGTCGACCT GGGGGTACGC GCCGCAGAGG CGGAGGCGGG CAACGTCGCG
TGGCTCACCT CGACCCGCCG GGGCTGGCCG TACGTCATCT GGAAGTACGC GGCGACACTG
GACGGGCGGT CAGCGGCTGC CGACGGTACC AGCATGTGGA TCACCTCCGA GGTGGCCCGG
ATGGACGTGC ACGCGTTGCG CGGCACCGTG GACGCCGTGC TCGCCGGGGT GGGCACCGTG
CTCGCCGACG ACCCGCGCCT GACCGTCCGG AACCTGCGCG ACGGAAGCCT CGCCATCCGG
CAGCCGCTAC GGGTGGTGGT GGACTCGACG GGCCGGACCC CGCCGGGGGC GCGGGTCCGG
GACGACGCCG CGCCCACCTG GATCGCCACC GCCGAGGAGG TCGGTGTCGA CCCGGAGGGC
CGGGTCGAGC TGGCGGGGCT GCTCGCCGCG CTGCACCAGC GCGGGGTACG CGCCGCGCTG
GTGGAGGGAG GGCCGCGGTT GGCCGGCGCG TTCCTCGCCG CCGGGCTCGT CGACAAGATC
GTCGGCTACG TCGCGCCCCG GCTGCTCGGC GCCGGCCCGG CCGCACTCAC GGAGGCGGGC
GTGACCACGA TCACCGAGGC CATCGACTGC GAGGTCGTTG ACGTTACCCA GGTCGGTCCC
GACCTGCGGA TCACCGCACT GCCCCGGAAG AGGGAGGGCT GA
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| Protein sequence | MAGVSVDEAM RRAVELAARG LGTTSPNPVV GCVLLDPGGR VVGEGFHAYA GGPHAEIVAL
AQAGERARGG TAVVTLEPCD HTGRTGPCST ALVQAGIARV VIAVPDPNRA ASGGAATLRA
AGIRVDLGVR AAEAEAGNVA WLTSTRRGWP YVIWKYAATL DGRSAAADGT SMWITSEVAR
MDVHALRGTV DAVLAGVGTV LADDPRLTVR NLRDGSLAIR QPLRVVVDST GRTPPGARVR
DDAAPTWIAT AEEVGVDPEG RVELAGLLAA LHQRGVRAAL VEGGPRLAGA FLAAGLVDKI
VGYVAPRLLG AGPAALTEAG VTTITEAIDC EVVDVTQVGP DLRITALPRK REG
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