Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1839 |
Symbol | aroK |
ID | 5704702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2124335 |
End bp | 2124838 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271340 |
Product | shikimate kinase |
Protein accession | YP_001536715 |
Protein GI | 159037462 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.230469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCGG TCTGCGTGTT GGTGGGCCCG CCCGGCTCGG GCAAGACCAC CGTCGGGCAA GCCCTCGCCG AGCTGCTCGG GGTTGAGTTC CGGGACACCG ATCTGGACGT CGAGGCGACG GCGGGCAAGC CGATCTCGGA GATCTTCATC GACGAGGGAG AGGCGCACTT CCGTGCCCTC GAACGGGAAG CGGTGGCGGC GCAGTTGGCC TCCGCCACCG GGGTGCTCGC CCTCGGCGGT GGCGCGGTGC TCGCCGAGCA GACGCGGGCC GCGCTGGTGG GGCACACCGT CGTGTACCTG TCGGTGGAGT TGCCCGACGC GGTACGGCGC GTCGGACTCG GCGCGGGGCG ACCCCTGCTC GCGGTCAACC CCCGCGCCAC CCTCAAGCAC CTGCTGGATC AGCGCCGGCC CTACTATGCG GCGGTGGCGA CGGCGACGGT GGTCACCGAC GGTCGGACGC CGGAGCAACT CGCCGTCGAG GTCGCCGCGT TACTCGCGGC ATGA
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Protein sequence | MAPVCVLVGP PGSGKTTVGQ ALAELLGVEF RDTDLDVEAT AGKPISEIFI DEGEAHFRAL EREAVAAQLA SATGVLALGG GAVLAEQTRA ALVGHTVVYL SVELPDAVRR VGLGAGRPLL AVNPRATLKH LLDQRRPYYA AVATATVVTD GRTPEQLAVE VAALLAA
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