Gene Sare_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1839 
SymbolaroK 
ID5704702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2124335 
End bp2124838 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content72% 
IMG OID641271340 
Productshikimate kinase 
Protein accessionYP_001536715 
Protein GI159037462 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.230469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCGG TCTGCGTGTT GGTGGGCCCG CCCGGCTCGG GCAAGACCAC CGTCGGGCAA 
GCCCTCGCCG AGCTGCTCGG GGTTGAGTTC CGGGACACCG ATCTGGACGT CGAGGCGACG
GCGGGCAAGC CGATCTCGGA GATCTTCATC GACGAGGGAG AGGCGCACTT CCGTGCCCTC
GAACGGGAAG CGGTGGCGGC GCAGTTGGCC TCCGCCACCG GGGTGCTCGC CCTCGGCGGT
GGCGCGGTGC TCGCCGAGCA GACGCGGGCC GCGCTGGTGG GGCACACCGT CGTGTACCTG
TCGGTGGAGT TGCCCGACGC GGTACGGCGC GTCGGACTCG GCGCGGGGCG ACCCCTGCTC
GCGGTCAACC CCCGCGCCAC CCTCAAGCAC CTGCTGGATC AGCGCCGGCC CTACTATGCG
GCGGTGGCGA CGGCGACGGT GGTCACCGAC GGTCGGACGC CGGAGCAACT CGCCGTCGAG
GTCGCCGCGT TACTCGCGGC ATGA
 
Protein sequence
MAPVCVLVGP PGSGKTTVGQ ALAELLGVEF RDTDLDVEAT AGKPISEIFI DEGEAHFRAL 
EREAVAAQLA SATGVLALGG GAVLAEQTRA ALVGHTVVYL SVELPDAVRR VGLGAGRPLL
AVNPRATLKH LLDQRRPYYA AVATATVVTD GRTPEQLAVE VAALLAA