| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1832 |
|---|
| Symbol | |
|---|
| ID | 5704637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2111608 |
|---|
| End bp | 2112564 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641271334 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001536709 |
|---|
| Protein GI | 159037456 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.52931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00130568 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTG TGCCGAGGGC GAGTGCTGTG CCGAGGGCGA GTGCTGTGCC GAGGGTGAGT
GCCGTGGTGC CCACCCGGGA CCGCCCGGAG TTGCTGCGGA CCGCGGTCCG CGCCATCCTC
GACCAGGACT ATCCGGGTGA GCTCGAGGTG GTCGTCGTGT ACGACCGTTC GGAGCCGGAT
CCGACCCTGA CCGAGCTGTC CCGACCGGGT CGATCGGTCC GGATCACTGA GAACGGCCGG
ACACCCGGCC TCGCGGGTGC CCGCAACACC GGCACCCTGG CTGCCACCGG CGAATTGATC
GCCTTCTGCG ACGATGACGA CGAGTGGCTG CCCGGCAAGC TGGCGGCGCA GGTCGAGGCG
CTCACCACCA CTCCGGGCGC CGAATTTGTC TCGTGTGGCA TCCGGGTGAG CTACGACGGA
CACACCGTCG ACCGGTCGCT GTCGCGTGAC CGGATCACTC TCGCGGACCT GCTGCGGGAC
CGGATGACCG AGCTGCACCC GTCGACGTTC CTCATCCGCG CCACCGCGCT CCGCGATGGC
TTCGGACTGG TCGACGAGGA GATTCCGGGC AGCTACGCGG AGGACTACGA GTTCCTGCTG
CGGGCGGCCC GCAGCGCACC GTTGGTCAGT CTGCGCACCC CGCTGGTGCT GGTGCGTTGG
CACAAACGGT CGTATTTCGC GCAGCGCTGG GACACCATCT CGGAGGCGTT GCAGTGGCTG
CTCGAGCGCT ACCCGGAGTT CGGCACCCAG CCGGCCGGTG AGGCACGGGT GGCGGGGCAG
ATCGCCTTCG CGCGCGCCGC GTCCGGTGAC CGCCAGGGCG CGCTGAGCTG GGCACGTCGC
ACCCTCCGGT GCAACCCGCG TGAGCCACGG GCCTACCTGG CGCTCGCGGT GGCCGGGCGG
GTGGTCCGGG CGGACGTGGT ACTGCGCACG CTGCACAAGC GTGGCCGGGG AATTTAG
|
|---|
| Protein sequence | MTAVPRASAV PRASAVPRVS AVVPTRDRPE LLRTAVRAIL DQDYPGELEV VVVYDRSEPD
PTLTELSRPG RSVRITENGR TPGLAGARNT GTLAATGELI AFCDDDDEWL PGKLAAQVEA
LTTTPGAEFV SCGIRVSYDG HTVDRSLSRD RITLADLLRD RMTELHPSTF LIRATALRDG
FGLVDEEIPG SYAEDYEFLL RAARSAPLVS LRTPLVLVRW HKRSYFAQRW DTISEALQWL
LERYPEFGTQ PAGEARVAGQ IAFARAASGD RQGALSWARR TLRCNPREPR AYLALAVAGR
VVRADVVLRT LHKRGRGI
|
|---|
| |