Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1831 |
Symbol | |
ID | 5704636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2110970 |
End bp | 2111611 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271333 |
Product | glycosyltransferase family 28 protein |
Protein accession | YP_001536708 |
Protein GI | 159037455 |
COG category | [S] Function unknown |
COG ID | [COG5017] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.627696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00418899 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGCCGG TGGGGGCCGA GTCGAGCCGC CGGATTCCCC GGCAACGGAG CCGGTCTGGT GCCGGTCAGG TGCAGGTGCT GGTCGCGGTC GGTACCGACA AGCACCCGTT CGACCGGCTG GTCGACTGGC TGCGGGGCTG GCAACCCACA GTCACAGATC GAGTGGCGCT GACCCTACAA CATGGTCACA CCGCAGTGGC CGACGTTCCT GGTGCGGTGG CCTTCCTGGG GCACGACGAG CTCCAGGCCG CGATGTCCGC GGCCGACCTC GTCGTCTGTC ACGGTGGTCC GGCCACCATC CTGGAGGCCC GTCGGCACGG CCGGGTGCCG ATCGTGGTCC CCCGGGATCC GTCACACGGC GAACATGTCG ACGACCATCA ACTGCGGTTC GCGCGTCGAC TCGGGGCGGC TGGCCTGGTG GTGGTGTGCG AGACCCGAGC GGCGTTCCTG GCGGCGCTCA CCGCTGGTCT GGCCGAGCCG TCCCGGTTCG TCGTCCGGGC CGACCCCGAC GCGGCCCGAG CGCGGGAGGC CGCCGTGGCC CGGGTCGGGG AGATCGTGGA AGACCTGGTG GTCGCGGCGA ACGGCCGACG GGCATGGTGG CGGCCGTGGT CACGGTCGCC TCGGAGAGGA GCGCGAGGAT GA
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Protein sequence | MTPVGAESSR RIPRQRSRSG AGQVQVLVAV GTDKHPFDRL VDWLRGWQPT VTDRVALTLQ HGHTAVADVP GAVAFLGHDE LQAAMSAADL VVCHGGPATI LEARRHGRVP IVVPRDPSHG EHVDDHQLRF ARRLGAAGLV VVCETRAAFL AALTAGLAEP SRFVVRADPD AARAREAAVA RVGEIVEDLV VAANGRRAWW RPWSRSPRRG ARG
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