Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1830 |
Symbol | |
ID | 5704635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2110399 |
End bp | 2110881 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641271332 |
Product | oligosaccharide biosynthesis protein Alg14-like protein |
Protein accession | YP_001536707 |
Protein GI | 159037454 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00817863 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0121958 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGACGT ACCACGAGGA TCAAGACGAT CCTCCGTTCC TGCTCCTCGT CGGCTCGAGT GGTGGGCATC TGGCCCAGTT ACTCGCGTTG CGCTCCTGGT ACGAGCGCTG GCACCGGTGC TGGGTAACCT TTGACACCCC GGACGCCCTG TCTCTGCTCG CTGACGAGGA GGTCGTCACG GCCCACCATC CGACCACCCG CAATGTGCGC AACCTGTTGC GTAACGCAGT GCTCGCGGTG CGGGTGTTGC GGCGGCGCCG GATCGCCGCG GTGGTCACGA CCGGAGCCGG GGTCGCCGTA CCGTTCGTGG TGTTCGCCTG GCTTCGACGG ATTCCCACCG TCTACATCGA GGTGTACGAC CGGATCGATA CCCCGACCCT GACCGCACGA CTGTGCCGCC CGTTCCTGTC CTCGATGCTC GTGCAGTGGG AGGAGCAACG CCGGCACTAC CCGGAGGCGA CTGTGGTGGG GCCGCTCCTG TGA
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Protein sequence | MGTYHEDQDD PPFLLLVGSS GGHLAQLLAL RSWYERWHRC WVTFDTPDAL SLLADEEVVT AHHPTTRNVR NLLRNAVLAV RVLRRRRIAA VVTTGAGVAV PFVVFAWLRR IPTVYIEVYD RIDTPTLTAR LCRPFLSSML VQWEEQRRHY PEATVVGPLL
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