Gene Sare_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1830 
Symbol 
ID5704635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2110399 
End bp2110881 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content66% 
IMG OID641271332 
Productoligosaccharide biosynthesis protein Alg14-like protein 
Protein accessionYP_001536707 
Protein GI159037454 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00817863 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0121958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACGT ACCACGAGGA TCAAGACGAT CCTCCGTTCC TGCTCCTCGT CGGCTCGAGT 
GGTGGGCATC TGGCCCAGTT ACTCGCGTTG CGCTCCTGGT ACGAGCGCTG GCACCGGTGC
TGGGTAACCT TTGACACCCC GGACGCCCTG TCTCTGCTCG CTGACGAGGA GGTCGTCACG
GCCCACCATC CGACCACCCG CAATGTGCGC AACCTGTTGC GTAACGCAGT GCTCGCGGTG
CGGGTGTTGC GGCGGCGCCG GATCGCCGCG GTGGTCACGA CCGGAGCCGG GGTCGCCGTA
CCGTTCGTGG TGTTCGCCTG GCTTCGACGG ATTCCCACCG TCTACATCGA GGTGTACGAC
CGGATCGATA CCCCGACCCT GACCGCACGA CTGTGCCGCC CGTTCCTGTC CTCGATGCTC
GTGCAGTGGG AGGAGCAACG CCGGCACTAC CCGGAGGCGA CTGTGGTGGG GCCGCTCCTG
TGA
 
Protein sequence
MGTYHEDQDD PPFLLLVGSS GGHLAQLLAL RSWYERWHRC WVTFDTPDAL SLLADEEVVT 
AHHPTTRNVR NLLRNAVLAV RVLRRRRIAA VVTTGAGVAV PFVVFAWLRR IPTVYIEVYD
RIDTPTLTAR LCRPFLSSML VQWEEQRRHY PEATVVGPLL