Gene Sare_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1808 
Symbol 
ID5707111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2082939 
End bp2083655 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content73% 
IMG OID641271310 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001536685 
Protein GI159037432 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000181534 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGTGG CCGGTTTTCC CGCTGATGCC TTCGGCACGA ACTGCTACGT GGTCGCGACG 
GCCCCGGGGG AGCAGTGCGT GGTGGTCGAT CCCGGCATCG GGGTCCTCGA CCGGCTCGAT
GCCCTGCTGG CCGAGCACCG GCTGCACCCG GCCGCCGTCC TGCTGACCCA CGGCCACCTC
GACCACACCT TCTCCGTCGC GCCGGTCTGC GGGGCGCGCG GGGTCACCGC GTACGTGCAC
CCGGCGGACC GGGAACTGCT CGCCGACCCG GCGAAAGGGC TCTCGGCCGA CCTGGCCGGG
CTGTTCGGCG GCCGCCTGCC TTACACCGAG CCGGAGGACG TCGCCGAGCT GACCGACGGC
GCCACGCTCG ACCTTGCCGG GTTGGAGATC ACCGTCGACC ATGCGCCCGG CCACACCGGC
GGGTCGGTGC TCTTCCGGTT GCCCGGCGCG GACTCCCGCT GGGAGGCGGA CGAGATCTGC
CTCTCCGGTG ACGTGCTGTT CGCCGGGTCG ATCGGTCGCA CCGACCTGCC GGGCGGCAGC
CTCCCGACGA TGCTCGCCAG CCTGCGGAGC AAGGTTCTCC CGCTGGCGGA CGACACGGTC
GTGCTGCCCG GCCACGGTCC CGCGACGACC ATCGGCCGTG AACGCGCATC CAACCCGTAC
CTCGTCGAGG TGGCGGGCGA CGGGGTGCGA CCTGCGGCCC CCGCCCGCGG CTTGTAG
 
Protein sequence
MLVAGFPADA FGTNCYVVAT APGEQCVVVD PGIGVLDRLD ALLAEHRLHP AAVLLTHGHL 
DHTFSVAPVC GARGVTAYVH PADRELLADP AKGLSADLAG LFGGRLPYTE PEDVAELTDG
ATLDLAGLEI TVDHAPGHTG GSVLFRLPGA DSRWEADEIC LSGDVLFAGS IGRTDLPGGS
LPTMLASLRS KVLPLADDTV VLPGHGPATT IGRERASNPY LVEVAGDGVR PAAPARGL