| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1805 |
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| Symbol | |
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| ID | 5707108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 2078331 |
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| End bp | 2080814 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641271307 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001536682 |
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| Protein GI | 159037429 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.388708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000728185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGTCCCACG ATGTCGCCCC TCCGGTGGAG GGCACGGTGC AACCGACAGG CGATAGTTCG
GTGACCGACC GCAACGGTGA CTCCCGCTCC CGGGTCGGCC CAGGCCACGG CCCTGGCGAA
TCCGACGCCA TCCGCACCGG CCCGACCGTG GGGAGTGAGG GGGCCGTCGT CCCGATCCGA
GGCGACTTCT CGGGCGACCC CGCCCCAGGC GGTGGGTTCG CGCTCTCCAA CGCGCCGACG
GGGCGTCGGG TGCGAGCCCG GCTGGCCCGG TTCAACGCAC CCTGGCAGTC CTCGCAGGTC
AGCGAGGTAC TGGAGCCGCT GATCGCCACC CACCGGGAGA ACCACCCGAA GGCGGACGCG
CGGCTGTTGC AACGCGCCTT CGACACGGCG GCCCGCTGGC ACTCCGGCCA GTACCGCAAG
TCCGGCGACC CGTACATCAC GCACCCGCTC GCGGTGGCCA CCATCCTGGC CAACCTGGGA
ATGGACACCA CCACGCTGGT CGCGGCGCTG CTGCACGACA CGATCGAGGA CACCGAGTAC
ACGCTCGACC AGATGCGGAC CGACTTCGGT GGCGAGGTGG CGCTGCTGGT CGACGGTGTC
ACCAAGCTCG ACAAGGTCAA GCTGGGTGAC GCGGCGAAGG CGGAGACGAT TCGCAAGATG
GTCGTCGCCA TGGCCAAGGA CCCGCGGGTT CTGGTGATCA AGCTGGCCGA CCGGCTGCAC
AACATGCGTA CCCTGATCTT CCTGCCGCGC CCGAAGCAGG AGCAGAAGGC CAAGGAGACC
CTGGAGATCC TGGCCCCGCT GGCGCATCGC CTGGGCATGA ACACGATCAA GTGGGAGTTG
GAGGACCTGG CCTTCGGCAC CCTGTTCCCG AAGCGGTACG AGGAGATCAA CCGACTGATC
GGGGAGCACC AGCCGCAGCG GGAGGCGCTG CTGCGGCAGG TGACCAAGAA GGTCGGCACC
GACCTGAAAG CCGCCAAGAT CAGGGCGGAG GTGACCGGCC GGCCGAAGCA CCTGTACTCG
ATCTACCAGA AGATGATCGT GCGTGGGCGG GACTTCAACG ACATCTACGA CCTGGTGGGT
GTGCGGATCC TGGTCGACAC GGTGCGGGAC TGCTACGCGG CGTTGGGTGT GATCCACGCG
AACTGGCAGC CGGTGCCGGG TCGGTTCAAG GACTACATCG CGATGCCGAA GTTCAACATG
TACCAGTCGT TGCACACGAC GGTGATCGGG CCCACCGGCA AGCCGGTGGA GATGCAGATC
CGCACCTACG CGATGCACCG TACCGCCGAG TTCGGTATAG CCGCGCACTG GAAGTACAAG
GAGCACAAGG GCACCCAGAT CGTCGGTCCG CCGGCGCACA TCGACGAGAT GACCTGGTTG
CGGCAGTTGC TGGACTGGCA GCGGGAGGCG GCCGACCCGA GCGAGTTCCT GGACGCGCTG
CGGTTCGACC TGTCCAGCCA GGAGGTGTAC GTCTTCACCC CGAAGGGTGA CGTCTTTCCG
TTGCCGACCG GGTCGACGCC GGTGGACTTC GCGTACGCGG TGCACACCGA GGTGGGGCAC
AAGTGCATCG GGGCGCGGGT CAACGGCAAG TTGGTGCCGT TGGAGTCGAC GCTGTCCAAC
GGCGATGTGA TCGAGATCTT CACCTCGAAG TCGGACACGG CCGGTCCGAC CAAGGACTGG
CTGGGGTTCG TCAAGAGCCC GCGGGCGCGG ACGAAGATTC GGCAGTACTT CAACAAGGAG
CGGCGCGAGG AGGCGATCGA GGCCGGTAAG GACGCGATCG TCAAGGCGAT GCGCAAGCAG
GGGATGCCGC TGCAGCGGAT GCTCAGCTCC GACAACCTGA TGGCGATCGC CCGGGATCTG
CACCTGGCCG ACGTCGCGTC GCTGTACGCG GCGGTCGGTG ACAGTCATGT CTCCGCCCAG
TCGGTGGTGC AGAAACTGAT GGCCTCCTAC GGCGGTGAGG AGGGCGCGGT CGAGGACATC
GCCGAGACCG CTGTGGCCAC CCGTCCGCCG CGGAGCCGGG CCAACAGCAG CGATCCGGGT
GTCGTCGTCC GGGGCGTCAG CGATGTGTGG ATCAAGCTGG CCCGCTGCTG TACCCCGGTC
CCGCCGGACT CGGTCTTCGG ATTCGTCACC CGCTCGGGCG GGGTGAGCGT GCACCGGGAC
GACTGCGCCA ACGCCGAGGA CCTCAAGGCG CAGGGGGAGC GGGTCGTGGA GGTGGGCTGG
AAGCTCACCA GCGCGTCGAC CTTCCTCGTC GCCATCCAGG TCGAGGCGCT CGACCGGCAC
AAGCTGCTCA CCGACGTGAC CCTGGTGCTC TCCGACGAGC GGGTCAACAT CCTCTCCGCG
ACCGTGACGA CCACGCGGGA TCGGGTGGCG GTGAGCCGGT TCAGTTTCGA GATGGCCGAC
CCGAAGCACC TGGGGCACCT GCTGGCCGCG GTCCGTAAGG TCGACGGCGT CTTCGACGCC
TACCGGGTCA CCTCCGGTTC CTGA
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| Protein sequence | MSHDVAPPVE GTVQPTGDSS VTDRNGDSRS RVGPGHGPGE SDAIRTGPTV GSEGAVVPIR
GDFSGDPAPG GGFALSNAPT GRRVRARLAR FNAPWQSSQV SEVLEPLIAT HRENHPKADA
RLLQRAFDTA ARWHSGQYRK SGDPYITHPL AVATILANLG MDTTTLVAAL LHDTIEDTEY
TLDQMRTDFG GEVALLVDGV TKLDKVKLGD AAKAETIRKM VVAMAKDPRV LVIKLADRLH
NMRTLIFLPR PKQEQKAKET LEILAPLAHR LGMNTIKWEL EDLAFGTLFP KRYEEINRLI
GEHQPQREAL LRQVTKKVGT DLKAAKIRAE VTGRPKHLYS IYQKMIVRGR DFNDIYDLVG
VRILVDTVRD CYAALGVIHA NWQPVPGRFK DYIAMPKFNM YQSLHTTVIG PTGKPVEMQI
RTYAMHRTAE FGIAAHWKYK EHKGTQIVGP PAHIDEMTWL RQLLDWQREA ADPSEFLDAL
RFDLSSQEVY VFTPKGDVFP LPTGSTPVDF AYAVHTEVGH KCIGARVNGK LVPLESTLSN
GDVIEIFTSK SDTAGPTKDW LGFVKSPRAR TKIRQYFNKE RREEAIEAGK DAIVKAMRKQ
GMPLQRMLSS DNLMAIARDL HLADVASLYA AVGDSHVSAQ SVVQKLMASY GGEEGAVEDI
AETAVATRPP RSRANSSDPG VVVRGVSDVW IKLARCCTPV PPDSVFGFVT RSGGVSVHRD
DCANAEDLKA QGERVVEVGW KLTSASTFLV AIQVEALDRH KLLTDVTLVL SDERVNILSA
TVTTTRDRVA VSRFSFEMAD PKHLGHLLAA VRKVDGVFDA YRVTSGS
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