Gene Sare_1798 details

Gene Information

• Locus tag: Sare_1798
• Symbol: ruvC
• ID: 5708381
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora arenicola CNS-205
• Kingdom: Bacteria
• Replicon accession: NC_009953
• Strand: +
• Start bp: 2071369
• End bp: 2071896
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 641271300
• Product: Holliday junction resolvase
• Protein accession: YP_001536675
• Protein GI: 159037422
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0451382
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 4
• Fosmid unclonability p-value: 0.00012152
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGCGCGTGC TCGGCATCGA CCCGGGGCTG ACCCGGTGCG GGGTCGGCGT GGTCGAGGGC 
GTGCCGGGGC GTCCCTGCAC GTTGATCGCC TACCACGTCG TGCGCACCGA CCCTGATGAC 
GAGTTGCCGC TGCGTCTGCT GCATCTGGAC CGGTCGCTGA CGGCCCTGGT GGCCGAGCAT 
CGGCCGGACG GCGTGGCCGT CGAGCGGGTG TTCAGCCAGC ACAACGTCCG CACGGTGATG 
GGCACGGCAC AGGCCAGCGG GGTCGCCGTG CTCGCCGGGG CCCGGGCCGG GATTCCCGTG 
CAGACCTACA CACCGAGCGA GGTGAAGGCG GCGGTGACCG GCTCCGGCCA GGCCGACAAG 
GCGCAGATGA CCGCGATGGT GACCCGGCTG CTGCGGCTGT CCGAGCCGCC CCGCCCGGCG 
GACGCCGCCG ATGCCCTGGC CCTGGCCATC TGTCACGTGT GGCGCGGCGG TACCCGTTCG 
AGGCTGGCCG CCGCCGCCGA TCGGGCACGA CGAGGAGGAG GACGATGA 

 

Protein sequence

MRVLGIDPGL TRCGVGVVEG VPGRPCTLIA YHVVRTDPDD ELPLRLLHLD RSLTALVAEH 
RPDGVAVERV FSQHNVRTVM GTAQASGVAV LAGARAGIPV QTYTPSEVKA AVTGSGQADK 
AQMTAMVTRL LRLSEPPRPA DAADALALAI CHVWRGGTRS RLAAAADRAR RGGGR