Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1797 |
Symbol | |
ID | 5708380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2070319 |
End bp | 2071101 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641271299 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001536674 |
Protein GI | 159037421 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.142794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000139658 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGGCAG ATCCCAGGAC GACCCCCCAC GTCGTACAGG TCGATCTCAC CGGCCGGACC GCCCTGGTGA CCGGGGGCGG GAGCGGCATC GGACGGACGT GCGCGCGGCG GCTGGGCGCG GCCGGCGCCA CGGTGGTCGT GGTGGACCGT GACCTCGCCG CGGCCCGGGC GGTCGCCGCC GAGGTGGGCG GCCGGGCCGT GGGCGTCGAC CTGGCGGACC CGGAGGCGGT CGACCGCCTC GACACCAACG TCGACATCGT GGTGAACAAC GCCGGACTCC AGCACGTCGC CCCGGTCGAG GAGTTCGCCG TGGAACGCTT CGAACACCTG CATCGGGTGA TGGTCCAGGC CCCGTTCCTC GTCATCCGCC GGGCCCTGCC ACACATGTAC GCCGAACGGT GGGGGCGCAT CGTCAACATC TCCTCGGTGC ACGGGCTGCG CGCCTCGCCG TACAAGGCGG CGTACGTGTC GGCGAAACAC GCGCTGGAGG GGCTGTCCAA GGTGGTGGCG CTGGAGGGCG CCGGGCACGG GGTGACGGCC AACTGCATCA GCCCGGCGTA CGTGCGCACC GCGCTGGTGC AGGACCAGAT CGTGGACCAG GCCGCCATCC ACGGCATCTC GGAGACCGAG GTCGTCGAGA AGATCATGCT GGCTCGGGCG GCCATCAAGC GGCTGATCGA ACCGGAGGAG GTGGCCGAGT TGGTGGCGTA CCTGTGCTCA CCACCGGCGG CGTTCATCAC CGGTGCGTCC ATCGCGCTCG ACGGAGGCTG GACGGCGAAC TAG
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Protein sequence | MTADPRTTPH VVQVDLTGRT ALVTGGGSGI GRTCARRLGA AGATVVVVDR DLAAARAVAA EVGGRAVGVD LADPEAVDRL DTNVDIVVNN AGLQHVAPVE EFAVERFEHL HRVMVQAPFL VIRRALPHMY AERWGRIVNI SSVHGLRASP YKAAYVSAKH ALEGLSKVVA LEGAGHGVTA NCISPAYVRT ALVQDQIVDQ AAIHGISETE VVEKIMLARA AIKRLIEPEE VAELVAYLCS PPAAFITGAS IALDGGWTAN
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