Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1792 |
Symbol | |
ID | 5708375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2064316 |
End bp | 2065008 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641271294 |
Product | ABC transporter related |
Protein accession | YP_001536669 |
Protein GI | 159037416 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000519176 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTGCGCA TTGAGAACCT GTCCGCCTGG TACGGCGAGG CACGGGTGTT GCGGGAGGTC GGTCTGCACG TGCGACCCGG CGAGGTGGTC ACCCTGGTGG GACGCAACGG CGCCGGCAAG TCGACCCTGC TGCGCTGCGT CATGGGCCTG CACGCCGGCC TGCGGGGCAC CGTCGAGCTG GACGGGCGGG ACATCGGGAA ACTGTCGGCG AACCAGCGGG CACGGTTGGG CATGGGCTGG GTTCCCGACG ACCGGGGCAG CTACGCCACG CTGACCGTGA CGGAGAACCT GACCCTGCCG CCGACCGTGG GGCCGGACCC GTGGTCGCTG GAGCGGGTGT ACGAGGCGTT TCCCGCCCTG TACGGGCGGC GTGACTCGGC CGCCACGACG CTGTCCGGCG GTGAGCAGCA GATGCTGGCG CTGGCGCGGG TGCTGCGGAT GGGCGCCCGC ATGCTGCTCT GCGACGAACC GACCGAAGGG CTGTCGCCGT TGCTCGTGCA GCAGGTCGGT GACCTGCTGC GCGAAGCCAA GCGGCACGGG GTGACGGTGC TGTTGGTCGA GCAGAACCTG CGTTTCGCCA CCGGCGTCGC CGACCGGCAC TACCTGCTGG CCGAGGGGCG CGTCGCGGCG GCGATGGACA ACTCCGAGGT GCAGTCGCGG GAACGTGAAC TGCTGTCGTA CCTCGGGATC TGA
|
Protein sequence | MLRIENLSAW YGEARVLREV GLHVRPGEVV TLVGRNGAGK STLLRCVMGL HAGLRGTVEL DGRDIGKLSA NQRARLGMGW VPDDRGSYAT LTVTENLTLP PTVGPDPWSL ERVYEAFPAL YGRRDSAATT LSGGEQQMLA LARVLRMGAR MLLCDEPTEG LSPLLVQQVG DLLREAKRHG VTVLLVEQNL RFATGVADRH YLLAEGRVAA AMDNSEVQSR ERELLSYLGI
|
| |