Gene Sare_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1792 
Symbol 
ID5708375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2064316 
End bp2065008 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID641271294 
ProductABC transporter related 
Protein accessionYP_001536669 
Protein GI159037416 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000519176 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCGCA TTGAGAACCT GTCCGCCTGG TACGGCGAGG CACGGGTGTT GCGGGAGGTC 
GGTCTGCACG TGCGACCCGG CGAGGTGGTC ACCCTGGTGG GACGCAACGG CGCCGGCAAG
TCGACCCTGC TGCGCTGCGT CATGGGCCTG CACGCCGGCC TGCGGGGCAC CGTCGAGCTG
GACGGGCGGG ACATCGGGAA ACTGTCGGCG AACCAGCGGG CACGGTTGGG CATGGGCTGG
GTTCCCGACG ACCGGGGCAG CTACGCCACG CTGACCGTGA CGGAGAACCT GACCCTGCCG
CCGACCGTGG GGCCGGACCC GTGGTCGCTG GAGCGGGTGT ACGAGGCGTT TCCCGCCCTG
TACGGGCGGC GTGACTCGGC CGCCACGACG CTGTCCGGCG GTGAGCAGCA GATGCTGGCG
CTGGCGCGGG TGCTGCGGAT GGGCGCCCGC ATGCTGCTCT GCGACGAACC GACCGAAGGG
CTGTCGCCGT TGCTCGTGCA GCAGGTCGGT GACCTGCTGC GCGAAGCCAA GCGGCACGGG
GTGACGGTGC TGTTGGTCGA GCAGAACCTG CGTTTCGCCA CCGGCGTCGC CGACCGGCAC
TACCTGCTGG CCGAGGGGCG CGTCGCGGCG GCGATGGACA ACTCCGAGGT GCAGTCGCGG
GAACGTGAAC TGCTGTCGTA CCTCGGGATC TGA
 
Protein sequence
MLRIENLSAW YGEARVLREV GLHVRPGEVV TLVGRNGAGK STLLRCVMGL HAGLRGTVEL 
DGRDIGKLSA NQRARLGMGW VPDDRGSYAT LTVTENLTLP PTVGPDPWSL ERVYEAFPAL
YGRRDSAATT LSGGEQQMLA LARVLRMGAR MLLCDEPTEG LSPLLVQQVG DLLREAKRHG
VTVLLVEQNL RFATGVADRH YLLAEGRVAA AMDNSEVQSR ERELLSYLGI